Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24c03
(572 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 241 1e-63
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 241 1e-63
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 241 1e-63
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 241 1e-63
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 241 1e-63
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 241 1e-63
U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein. 220 3e-57
L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein. 89 1e-17
L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein. 89 1e-17
L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein. 82 1e-15
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 30 5.0
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 241 bits (590), Expect = 1e-63
Identities = 119/150 (79%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 126 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQ 302
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 303 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 482
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 483 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 572
KTVANMIKGKTPEEIRKTFNIKNDFT EE
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
>U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein.
Length = 150
Score = 220 bits (537), Expect = 3e-57
Identities = 109/137 (79%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Frame = +3
Query: 165 FVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATYHKDDPPLPE 341
F VDVEIAK SVTIKT PLPNVN+AILKKVIQW T+HKDDPP PE
Sbjct: 1 FEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPE 60
Query: 342 DDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 521
DDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE
Sbjct: 61 DDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 120
Query: 522 EIRKTFNIKNDFTAAEE 572
EIRKTFNIKNDFT EE
Sbjct: 121 EIRKTFNIKNDFTEEEE 137
>L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +3
Query: 351 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 491
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +3
Query: 351 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 491
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 82.2 bits (194), Expect = 1e-15
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +3
Query: 351 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 491
N+EKRTD I +WD FLK+D GTLFE+ILAANYLDIKGLLDV CKTV
Sbjct: 1 NEEKRTDAIPAWDQKFLKIDPGTLFEVILAANYLDIKGLLDVPCKTV 47
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
1B protein.
Length = 2468
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 TY-HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQ 413
TY H D PP P D + R D+S D + L ++Q
Sbjct: 2194 TYKHMDPPPAPVQDRSPSPRHPDVSMVDPEALAIEQ 2229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,307,623
Number of Sequences: 237096
Number of extensions: 1267779
Number of successful extensions: 2749
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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