Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c01
         (469 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058594-1|AAL13823.1|  619|Drosophila melanogaster LD28822p pro...    30   1.8  
AE014134-1025|AAF52327.1|  619|Drosophila melanogaster CG9115-PA...    30   1.8  
AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p pro...    27   9.6  
AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10 ...    27   9.6  
AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer com...    27   9.6  
AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA...    27   9.6  

>AY058594-1|AAL13823.1|  619|Drosophila melanogaster LD28822p
           protein.
          Length = 619

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 68  QHCILLENKLIFKYDFQEYFFSFETLATKNNNEINSLQTTNKIRLTMH 211
           QH      +L+ K D  + F     L  K+NN  NS+QTT ++   MH
Sbjct: 574 QHGCQRTRELLSKQD--QLFKLVNELRLKSNNRSNSMQTTTRLASPMH 619


>AE014134-1025|AAF52327.1|  619|Drosophila melanogaster CG9115-PA
           protein.
          Length = 619

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 68  QHCILLENKLIFKYDFQEYFFSFETLATKNNNEINSLQTTNKIRLTMH 211
           QH      +L+ K D  + F     L  K+NN  NS+QTT ++   MH
Sbjct: 574 QHGCQRTRELLSKQD--QLFKLVNELRLKSNNRSNSMQTTTRLASPMH 619


>AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p
           protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 138 KHLQQKTTMK*IAYKLQTKLD*LCIAYYTNNIIEKRSQI*IFTKLFTEYVSNLEE 302
           +H   +T      Y+   KL  L I    +NI+E    + +F+K+  EY  +L+E
Sbjct: 45  QHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDE 99


>AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10
           protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 138 KHLQQKTTMK*IAYKLQTKLD*LCIAYYTNNIIEKRSQI*IFTKLFTEYVSNLEE 302
           +H   +T      Y+   KL  L I    +NI+E    + +F+K+  EY  +L+E
Sbjct: 45  QHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDE 99


>AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer
           complex COPI delta-COPsubunit protein.
          Length = 498

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 138 KHLQQKTTMK*IAYKLQTKLD*LCIAYYTNNIIEKRSQI*IFTKLFTEYVSNLEE 302
           +H   +T      Y+   KL  L I    +NI+E    + +F+K+  EY  +L+E
Sbjct: 12  QHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDE 66


>AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA
           protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 138 KHLQQKTTMK*IAYKLQTKLD*LCIAYYTNNIIEKRSQI*IFTKLFTEYVSNLEE 302
           +H   +T      Y+   KL  L I    +NI+E    + +F+K+  EY  +L+E
Sbjct: 45  QHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDE 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,255
Number of Sequences: 53049
Number of extensions: 276867
Number of successful extensions: 567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)