Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24b22
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 30 1.7
05_07_0317 - 29193940-29193978,29194208-29194496,29194579-291947... 29 2.9
09_01_0133 - 1998528-1998566,1998672-1998710,1998796-1998946,199... 29 3.8
07_01_1161 - 10991245-10991283,10991389-10991427,10991513-109917... 29 3.8
06_02_0221 - 13209197-13209247,13209605-13209893,13209976-132101... 29 3.8
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 29 3.8
01_01_0023 + 177642-179462 29 3.8
05_03_0642 + 16510041-16510569,16510723-16510748,16510827-165112... 28 5.1
05_02_0015 - 5605403-5605574,5605653-5605840,5605934-5606539,560... 28 5.1
03_02_0329 - 7498951-7498989,7499219-7499507,7499590-7499760,749... 28 5.1
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 28 5.1
11_04_0039 + 12679350-12680057,12680136-12680582,12680670-126815... 28 6.7
03_05_0552 - 25477619-25477693,25477781-25478227,25478306-254783... 28 6.7
09_02_0172 + 5322396-5323103,5323182-5323508 27 8.9
08_02_1408 + 26860640-26860701,26860811-26860919,26861566-268617... 27 8.9
08_02_0373 + 16397003-16397015,16397742-16398091,16423530-164238... 27 8.9
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 27 8.9
06_03_0098 - 16621473-16621511,16621617-16621655,16621741-166220... 27 8.9
04_01_0347 - 4546566-4546604,4546710-4546748,4546834-4547059,454... 27 8.9
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F K +E + + Q+ E Q
Sbjct: 388 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDKKLESMRAKIRQEIREEQQ 444
>05_07_0317 -
29193940-29193978,29194208-29194496,29194579-29194749,
29194829-29195715,29195803-29196249,29196328-29197056
Length = 853
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q+
Sbjct: 293 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQI 350
>09_01_0133 -
1998528-1998566,1998672-1998710,1998796-1998946,
1999185-1999337,1999416-2000302,2000390-2000836,
2000915-2001190,2001215-2001622
Length = 799
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD ++ TS +EK+ + + K R S++ LT+ F + +E + + Q+ E Q+
Sbjct: 278 PDYAWQYKKRTSNKAEKDARLVAKIRESIRAELTSGFDEKLESMRAKIRQEIRKEQQI 335
>07_01_1161 -
10991245-10991283,10991389-10991427,10991513-10991738,
10991902-10992054,10992133-10992638,10992651-10993019,
10993107-10993553,10993752-10994339
Length = 788
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD ++ TS +EK+ + K R S++ LT+ F K +E + + Q+ E Q+
Sbjct: 246 PDYAWQYKKRTSNKAEKDARLEAKIRESIRAELTSEFDKKLESMRAKIRQEIREEQQI 303
>06_02_0221 -
13209197-13209247,13209605-13209893,13209976-13210146,
13210257-13211110,13211197-13211643,13211722-13212021,
13212130-13212450
Length = 810
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 257 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIQEEQQ 313
>02_03_0121 + 15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS ++K+ + K RAS++ LT+ F K +E + + Q+ E Q
Sbjct: 911 PDYAWQYKKRTSNKADKDARLEAKIRASIRAELTSEFDKKLESMRAKIRQEIREEQQ 967
>01_01_0023 + 177642-179462
Length = 606
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 541 FNVPLNSSMYFLNVVNRPFRLARFLTNSFSSFSLISEVFG 422
+ + LN ++ NV++RPF + N+F S S + G
Sbjct: 80 YGLSLNMVIFMFNVMHRPFAASANAVNNFLGISQASSLLG 119
>05_03_0642 +
16510041-16510569,16510723-16510748,16510827-16511273,
16511360-16512246,16512325-16512495,16512578-16512866,
16512952-16512990,16513096-16513134
Length = 808
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 235 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 291
>05_02_0015 -
5605403-5605574,5605653-5605840,5605934-5606539,
5606626-5607072,5607151-5607173,5607528-5607879
Length = 595
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 175 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQKIQEEQQ 231
>03_02_0329 -
7498951-7498989,7499219-7499507,7499590-7499760,
7499839-7500345,7500347-7500726,7500814-7501266
Length = 612
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 52 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 108
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 157 PDYAWQYKKRTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 213
>11_04_0039 +
12679350-12680057,12680136-12680582,12680670-12681556,
12681635-12681805,12681872-12682160,12682390-12682428
Length = 846
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD ++ TS +EK+ + K R S++ +LT+ F + +E + + Q+ E Q+
Sbjct: 286 PDYAWQYKKRTSNKAEKDARLEAKIRESIRAKLTSEFDEKLESMRAKIRQEIREEQQI 343
>03_05_0552 -
25477619-25477693,25477781-25478227,25478306-25478331,
25478485-25479013
Length = 358
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD + ++ TS +EK+ + K R S++ LT+ F + +E + + Q+ E Q+
Sbjct: 235 PDYVWQYKKRTSNKAEKDARLEAKIRESIRAELTSEFDEKLESMRAKIRQEIREEQQI 292
>09_02_0172 + 5322396-5323103,5323182-5323508
Length = 344
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQL 569
PD ++ TS +EK+ + K +AS++ LT+ F + +E + + Q+ E Q+
Sbjct: 286 PDYAWQYKKQTSNKAEKDARLEAKIQASIRAELTSEFDEKLESMRAKIRQEIREEQQI 343
>08_02_1408 +
26860640-26860701,26860811-26860919,26861566-26861739,
26861843-26861923,26862333-26862536,26862626-26862811
Length = 271
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 231 NHIVNPACNMININNLNKKQSNGLHITN 148
N IV AC + + + L K+ S GLH+++
Sbjct: 145 NDIVETACYLYHCDFLEKRHSKGLHMSD 172
>08_02_0373 +
16397003-16397015,16397742-16398091,16423530-16423829,
16423908-16424354,16424441-16425046,16425140-16425327,
16425406-16425576,16425659-16425702,16425763-16425947,
16426033-16426071,16426282-16426332
Length = 797
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 271 PDYKWQYKKRTSNKAEKDARLGAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 327
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 PD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
PD + ++ TS +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 190 PDYVWQYKKWTSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 246
>06_03_0098 -
16621473-16621511,16621617-16621655,16621741-16622029,
16622112-16622282,16622361-16623244,16623332-16623775,
16623854-16624561
Length = 857
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 429 TSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
TS +EK+ + K RAS+K LT+ F + +E + + Q+ E Q
Sbjct: 296 TSNKAEKDARLEAKIRASIKAELTSEFDEKLESMRAKIRQEIREEQQ 342
>04_01_0347 -
4546566-4546604,4546710-4546748,4546834-4547059,
4547222-4547374,4547453-4547706,4547734-4548366,
4548453-4548899,4548978-4549277,4549386-4549697,
4550190-4550243
Length = 818
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 396 MPD*LARFCPNTSEMSEKEEKELVKKRASLKGRLTT-FRKYIEELSGTLNQQQVNELQ 566
+PD ++ +S +EK+ + K RAS++ LT+ F + +E + + Q+ E Q
Sbjct: 271 LPDYAWQYKKRSSNKAEKDARLEAKIRASIRAELTSEFDEKLESMRAKIRQEIREEQQ 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,287
Number of Sequences: 37544
Number of extensions: 218054
Number of successful extensions: 481
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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