Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24b22
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058337-1|AAL13566.1|  490|Drosophila melanogaster GH11113p pro...    29   4.9  
AE014296-1561|AAN11980.1|  490|Drosophila melanogaster CG5288-PC...    29   4.9  
AE014296-1560|AAF50337.2|  490|Drosophila melanogaster CG5288-PB...    29   4.9  
AE014296-1559|AAF50338.2|  490|Drosophila melanogaster CG5288-PA...    29   4.9  
AY119451-1|AAM50105.1|  600|Drosophila melanogaster AT27686p pro...    29   6.5  
AE013599-3290|AAF46771.1|  600|Drosophila melanogaster CG13493-P...    29   6.5  

>AY058337-1|AAL13566.1|  490|Drosophila melanogaster GH11113p
           protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 426 NTSEMSEKEEKELVKKRASLKGRLTTFRKYIEELSGTLNQQQVNEL-QLRIGKIELLFEQ 602
           NT  M + + ++         GR+  FRK  EEL+G  N++   +L +L     E L E 
Sbjct: 342 NTRHMEQFKLRQRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLREL 401

Query: 603 YD 608
           Y+
Sbjct: 402 YE 403


>AE014296-1561|AAN11980.1|  490|Drosophila melanogaster CG5288-PC,
           isoform C protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 426 NTSEMSEKEEKELVKKRASLKGRLTTFRKYIEELSGTLNQQQVNEL-QLRIGKIELLFEQ 602
           NT  M + + ++         GR+  FRK  EEL+G  N++   +L +L     E L E 
Sbjct: 342 NTRHMEQFKLRQRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLREL 401

Query: 603 YD 608
           Y+
Sbjct: 402 YE 403


>AE014296-1560|AAF50337.2|  490|Drosophila melanogaster CG5288-PB,
           isoform B protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 426 NTSEMSEKEEKELVKKRASLKGRLTTFRKYIEELSGTLNQQQVNEL-QLRIGKIELLFEQ 602
           NT  M + + ++         GR+  FRK  EEL+G  N++   +L +L     E L E 
Sbjct: 342 NTRHMEQFKLRQRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLREL 401

Query: 603 YD 608
           Y+
Sbjct: 402 YE 403


>AE014296-1559|AAF50338.2|  490|Drosophila melanogaster CG5288-PA,
           isoform A protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 426 NTSEMSEKEEKELVKKRASLKGRLTTFRKYIEELSGTLNQQQVNEL-QLRIGKIELLFEQ 602
           NT  M + + ++         GR+  FRK  EEL+G  N++   +L +L     E L E 
Sbjct: 342 NTRHMEQFKLRQRALHVIQESGRVAKFRKICEELAGGANKEGAKQLGELMRQSHESLREL 401

Query: 603 YD 608
           Y+
Sbjct: 402 YE 403


>AY119451-1|AAM50105.1|  600|Drosophila melanogaster AT27686p
           protein.
          Length = 600

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 187 SKQKTE*WVTHH*FVLNIKLGSLPLFPGYLGSMD-YVADGFLFRYL 53
           SK   E +V  H  V+NI +G  P + GY G ++ +  + F   YL
Sbjct: 316 SKVSFEKFVKPHESVINIGIGQAPDYAGYYGQVELFKVNEFFSEYL 361


>AE013599-3290|AAF46771.1|  600|Drosophila melanogaster CG13493-PA
           protein.
          Length = 600

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 187 SKQKTE*WVTHH*FVLNIKLGSLPLFPGYLGSMD-YVADGFLFRYL 53
           SK   E +V  H  V+NI +G  P + GY G ++ +  + F   YL
Sbjct: 316 SKVSFEKFVKPHESVINIGIGQAPDYAGYYGQVELFKVNEFFSEYL 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,036,710
Number of Sequences: 53049
Number of extensions: 417258
Number of successful extensions: 1096
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)