Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24b10
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 64 2e-11
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 58 1e-09
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 32 0.083
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.19
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 27 3.1
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 26 4.1
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 26 5.4
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 5.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 5.4
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 25 7.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 7.2
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 25 7.2
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 9.5
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 9.5
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 64.1 bits (149), Expect = 2e-11
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 334 NLPPVKYSLAKSEETITEVTTLSNGLRVASEKK-FGQFCTAGVVIDSGPRYEVAYPNGIC 510
NLP + A + TE TTL NGL VA+E + Q T V +D+G R E A NG
Sbjct: 6 NLPKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAA 65
Query: 511 HFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
HFLE L+F T K ++ + E E G + SR+ TVY A
Sbjct: 66 HFLEHLAFKGT-KNRSQKALELEFENTGAHLNAYTSREQTVYYAHA 110
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 58.0 bits (134), Expect = 1e-09
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +1
Query: 340 PPVKYSLAKSEETITEVTT--LSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICH 513
P +K + + + EV T L NG+ + + G F GV + +G RYE +G+ H
Sbjct: 30 PALKSFYSTQDPALNEVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSH 89
Query: 514 FLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
F+++L+F AT + + M +LE GG C SR++ +Y
Sbjct: 90 FMDRLAFQATERTPVGE-MKAKLENLGGNYMCSTSRESMIY 129
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 31.9 bits (69), Expect = 0.083
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 502 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G+ HF E L F T K+ + + LE H GI + + + T Y
Sbjct: 65 GLAHFCEHLLFMGTKKYPDENEYRKYLESHNGISNAYTASNNTNY 109
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 30.7 bits (66), Expect = 0.19
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Frame = +1
Query: 52 ILREIEKFRKTLIFKISNLKNTLTDYVFISPLFVFGSNMSHVTDVK----FLVTRLFSLK 219
+ +EK T +SNL + + ++P + N+S + +K L+T F
Sbjct: 3454 LFANVEKPGSTFTNMVSNLITDARELMKLTPETINDDNLSEIKHLKSRKHLLLTETFKTL 3513
Query: 220 NSFQAPKWNIRKFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTL 399
+F ++ ++ + + LS ++ + +P L++ V SL KS + I + TL
Sbjct: 3514 KAF-GLQYRVKAGIE--ENLSNLRNLLAVIPTFPVTSLSIEKVDRSLMKSLDFIPKFQTL 3570
Query: 400 S 402
+
Sbjct: 3571 A 3571
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 232 APKWNIRKFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEE 375
APKW I +F + G S G++ P + +L+L ++Y L K++E
Sbjct: 605 APKWRINEFDETG---SVYYGALPYNYPEDDVLLDLDGLQY-LVKNDE 648
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 82 TLIFKISNLKNTLTDYVFISPLFVFGSNMSHVTDVKFLVTRLFSLKNS 225
++ K LKN ++D SP+++ G H + ++L FS+ S
Sbjct: 274 SITIKCKILKNGISDLAMKSPMYLPGPVEPHFSPSRYLTFEGFSVDES 321
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 575 RSITSRVANLWVAPKLSFSRK*QIPLG*ATSYL-GPESITTPAVQNCPNFFSEATLKPL 402
R+++ NL V PK+S + PL +++YL SI + + P SE T K L
Sbjct: 253 RTVSGESRNLMVDPKVSPYGNSRTPLRDSSNYLRDRRSINRQSSLSIPKSTSETTRKTL 311
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 408 LKSCFREKIWTVLYCWCC 461
LK C + K W V + +CC
Sbjct: 312 LKMCTKTKYWNVFFPFCC 329
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 280 SQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTLSNGLRVAS 423
S + S TP+ + + P +YS+ S IT T L++ + S
Sbjct: 567 SSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITS 614
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.4 bits (53), Expect = 7.2
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 217 KNSFQAPKWNIRKFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTT 396
K S PK + + ++ KL S P+PPLSE K+S A E I+ +
Sbjct: 225 KTSSSVPKQSTGENTKKAVKLETPLTSTPPIPPLSEP-------KHSPATVNEHISPPSA 277
Query: 397 LSN 405
L+N
Sbjct: 278 LTN 280
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 580 IHEALHRVLQIYGLPQSLVSRENDKFHWD 494
IH + +++ ++ LP+ + S EN+ WD
Sbjct: 1651 IHRLVFKLVVVFLLPREVASGENNYSWWD 1679
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 475 PRYEVA-----YPNGICHFLEKLSFGATHKFATRDVMLR 576
PRY+++ Y N HFL+ + +F T+D++ R
Sbjct: 115 PRYQISERNTVYLNAFFHFLDFIGMFTPFRFETKDLVRR 153
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.0 bits (52), Expect = 9.5
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +1
Query: 43 KSHILREIEKFRKTLIFKISNLKNTLTDYVFISPLFVFGSNMSHVTDVKFLVT---RLFS 213
++H +EIE F + + F + +LKNT + + L + ++ V+ + S
Sbjct: 495 RAHFKQEIEVFFREVYFPMLDLKNTSYNQKLHTLLIIQRICLNPRALVELYINYDCDRSS 554
Query: 214 LKNSFQAPKWNIRKFSQDGDKLSQIKGSVTPLPPL-SEAMLNLPPVKYSLAKSEETITEV 390
N F+ ++I K + +G + + LP L S + P + + A + + ++
Sbjct: 555 TTNVFEQLLFSISKVTTNGPSETISEDIEEILPSLESSERSSTPFLNTNSASLKSEVVQL 614
Query: 391 TTLSN 405
TT S+
Sbjct: 615 TTFSD 619
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 562 RVLQIYGLPQSLVSRENDKFHWDK 491
R + I GLP L S EN K ++DK
Sbjct: 239 RTVFISGLPNELCSTENLKAYFDK 262
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,554,906
Number of Sequences: 5004
Number of extensions: 52009
Number of successful extensions: 142
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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