BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24b10
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein. 143 4e-34
D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein. 143 4e-34
BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondria... 143 4e-34
BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondria... 143 4e-34
BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein. 143 4e-34
BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein. 143 4e-34
AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondri... 143 4e-34
AL592301-13|CAI13944.1| 146|Homo sapiens peptidase (mitochondri... 126 5e-29
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 70 8e-12
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 67 6e-11
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 62 2e-09
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 62 2e-09
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 62 2e-09
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 40 0.006
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 40 0.006
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 40 0.006
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 36 0.17
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 36 0.17
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 36 0.17
AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related pr... 36 0.17
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 36 0.17
BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related ... 31 4.7
>D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 39 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 98
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 99 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 158
Query: 649 D 651
D
Sbjct: 159 D 159
>D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 39 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 98
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 99 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 158
Query: 649 D 651
D
Sbjct: 159 D 159
>BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 36 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 95
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 96 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 155
Query: 649 D 651
D
Sbjct: 156 D 156
>BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 36 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 95
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 96 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 155
Query: 649 D 651
D
Sbjct: 156 D 156
>BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein.
Length = 526
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 37 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 96
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 97 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 156
Query: 649 D 651
D
Sbjct: 157 D 157
>BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein.
Length = 521
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 32 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 91
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 92 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 151
Query: 649 D 651
D
Sbjct: 152 D 152
>AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 143 bits (347), Expect = 4e-34
Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 36 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 95
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SRDTT+YA SA
Sbjct: 96 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSA 155
Query: 649 D 651
D
Sbjct: 156 D 156
>AL592301-13|CAI13944.1| 146|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 146
Score = 126 bits (305), Expect = 5e-29
Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Frame = +1
Query: 292 GSVTPLPPLSEAMLNLP-PVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVID 468
G P PLS + +P PV ++ E+ T+VTTL NGLRVAS+ KFGQFCT G++I+
Sbjct: 36 GGAYPNIPLSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILIN 95
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSR 621
SG RYE Y +GI HFLEKL+F +T +F ++D +L LE+HGGICDCQ SR
Sbjct: 96 SGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSR 146
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 69.7 bits (163), Expect = 8e-12
Identities = 40/89 (44%), Positives = 50/89 (56%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T VT L +GLRVASE CT G+ ID+G RYE NG HFLE ++F T K +
Sbjct: 58 TRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQL 117
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATSA 648
D+ L E+E G + SR+ TVY A
Sbjct: 118 DLEL-EIENMGAHLNAYTSREQTVYYAKA 145
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 66.9 bits (156), Expect = 6e-11
Identities = 39/89 (43%), Positives = 49/89 (55%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T VT L +GLRVASE CT G+ ID+G RYE NG HF E ++F T K +
Sbjct: 49 TRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFPEHMAFKGTKKRSQL 108
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATSA 648
D+ L E+E G + SR+ TVY A
Sbjct: 109 DLEL-EIENMGAHLNAYTSREQTVYYAKA 136
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T+V+ L NGLRVASE+ CT GV ID G R+E NG +FLE L+F T K
Sbjct: 48 TQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGT-KNRPG 106
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATSA 648
+ +E+E G + +R+ T Y A
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKA 135
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T+V+ L NGLRVASE+ CT GV ID G R+E NG +FLE L+F T K
Sbjct: 48 TQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGT-KNRPG 106
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATSA 648
+ +E+E G + +R+ T Y A
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKA 135
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T+V+ L NGLRVASE+ CT GV ID G R+E NG +FLE L+F T K
Sbjct: 48 TQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGT-KNRPG 106
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATSA 648
+ +E+E G + +R+ T Y A
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKA 135
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 40.3 bits (90), Expect = 0.006
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 385 EVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRD 564
E T L NGL +AS + + G+ I +G RYE G H L +L+ T K A+
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLL-RLTSSLTTKGASSF 97
Query: 565 VMLRELERHGGICDCQGSRDTTVY 636
+ R +E GG +R+ Y
Sbjct: 98 KITRGIEAVGGKLSVTATRENMAY 121
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 40.3 bits (90), Expect = 0.006
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 385 EVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRD 564
E T L NGL +AS + + G+ I +G RYE G H L +L+ T K A+
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLL-RLTSSLTTKGASSF 97
Query: 565 VMLRELERHGGICDCQGSRDTTVY 636
+ R +E GG +R+ Y
Sbjct: 98 KITRGIEAVGGKLSVTATRENMAY 121
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 40.3 bits (90), Expect = 0.006
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 385 EVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRD 564
E T L NGL +AS + + G+ I +G RYE G H L +L+ T K A+
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLL-RLTSSLTTKGASSF 97
Query: 565 VMLRELERHGGICDCQGSRDTTVY 636
+ R +E GG +R+ Y
Sbjct: 98 KITRGIEAVGGKLSVTATRENMAY 121
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 KFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVT 393
++ DG+ ++ K + PLPP+ + ++ PP + + E IT +T
Sbjct: 182 EYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLT 228
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 KFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVT 393
++ DG+ ++ K + PLPP+ + ++ PP + + E IT +T
Sbjct: 163 EYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLT 209
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 KFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVT 393
++ DG+ ++ K + PLPP+ + ++ PP + + E IT +T
Sbjct: 63 EYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLT 109
>AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related
protein protein.
Length = 709
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 KFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVT 393
++ DG+ ++ K + PLPP+ + ++ PP + + E IT +T
Sbjct: 63 EYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLT 109
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 35.5 bits (78), Expect = 0.17
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 253 KFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVT 393
++ DG+ ++ K + PLPP+ + ++ PP + + E IT +T
Sbjct: 182 EYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLT 228
>BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related 2
homolog A (S. cerevisiae) protein.
Length = 1938
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 268 GDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTLSNG 408
G KLS+ S+ PP+ A++N + SL +E ++ E+ S G
Sbjct: 1257 GQKLSESPASLPSCPPVETALINQRDLADSLLDTERSLRELAQPSGG 1303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,498,101
Number of Sequences: 237096
Number of extensions: 1714013
Number of successful extensions: 2937
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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