Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24b10
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 93 2e-19
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 34 0.10
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 34 0.10
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 34 0.10
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 33 0.18
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 33 0.18
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 33 0.18
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 29 2.2
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 28 5.0
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 28 5.0
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
+ VT L NGL+V +E +G F T GV I+SG RYE +P GI +EKL++ ++ F++R
Sbjct: 19 SRVTRLPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSR 78
Query: 562 DVMLRELERHGGICDCQGSRDTTVYATS 645
D + +LE + GI DCQ +RDT +YA S
Sbjct: 79 DEVFAKLEENSGIVDCQSTRDTMMYAAS 106
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1
Query: 382 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 561
T VTTL NG RVA+E G T GV ID+G RYE NG HFLE ++F T + TR
Sbjct: 30 TIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPR-RTR 88
Query: 562 DVMLRELERHGGICDCQGSRDTTVY 636
+ E+E G + SR++T Y
Sbjct: 89 MGLELEVENIGAHLNAYTSRESTTY 113
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/101 (37%), Positives = 49/101 (48%)
Frame = +1
Query: 346 VKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEK 525
VK LA + + EVTTL NG RV +E T GV I++G R+E NG+ HFLE+
Sbjct: 28 VKDVLASAPQA--EVTTLKNGFRVVTEDNGSATATVGVWIETGSRFENEKNNGVAHFLER 85
Query: 526 LSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSA 648
L T K A+ + EL G + RD T A
Sbjct: 86 LIHKGTGKRASA-ALESELNAIGAKLNSFTERDQTAVFVQA 125
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 361 AKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFL 519
AKS + T L NGLRV+S + G + + +G RY+ A G+ H +
Sbjct: 32 AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 361 AKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFL 519
AKS + T L NGLRV+S + G + + +G RY+ A G+ H +
Sbjct: 18 AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 361 AKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFL 519
AKS + T L NGLRV+S + G + + +G RY+ A G+ H +
Sbjct: 32 AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 361 AKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFL 519
AKS + T L NGLRV+S + G + + +G RY+ A G+ H +
Sbjct: 18 AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +1
Query: 304 PLPPLSEAMLNLPPVKYSL-AKSEETITEVT--TLSNGLRV--ASEKKFGQFCTAGVVID 468
PLP ++EA N+ ++ L K + E L+NG+RV S+ + A + +
Sbjct: 56 PLPKMTEAGKNIVLKRHDLIVKGAQDAREYRGLELTNGIRVLLVSDPTTDK-SAAALDVK 114
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G + G+ HF E + F T K+ + + + L H G + S D T Y
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNY 170
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +1
Query: 304 PLPPLSEAMLNLPPVKYSL-AKSEETITEVT--TLSNGLRV--ASEKKFGQFCTAGVVID 468
PLP ++EA N+ ++ L K + E L+NG+RV S+ + A + +
Sbjct: 56 PLPKMTEAGKNIVLKRHDLIVKGAQDAREYRGLELTNGIRVLLVSDPTTDK-SAAALDVK 114
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G + G+ HF E + F T K+ + + + L H G + S D T Y
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNY 170
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +1
Query: 304 PLPPLSEAMLNLPPVKYSL-AKSEETITEVT--TLSNGLRV--ASEKKFGQFCTAGVVID 468
PLP ++EA N+ ++ L K + E L+NG+RV S+ + A + +
Sbjct: 56 PLPKMTEAGKNIVLKRHDLIVKGAQDAREYRGLELTNGIRVLLVSDPTTDK-SAAALDVK 114
Query: 469 SGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G + G+ HF E + F T K+ + + + L H G + S D T Y
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNY 170
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = +1
Query: 361 AKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGA 540
A + + + +V L NGL V + + +G RYE A G+ H +
Sbjct: 15 AATTKPVEKVAKLGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRD 74
Query: 541 THKFATRDVMLRELERHGGICDCQGSRD 624
T ++ V+ L + GG+ SRD
Sbjct: 75 TQEYFGNTVVW-TLSQTGGVLKSFTSRD 101
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 391 TTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICH 513
T L+NGL+V S++ G + +G RYE G+ H
Sbjct: 24 TKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVH 64
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 502 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G+ HF E + F T K+ + + + L H G + + D T Y
Sbjct: 67 GLAHFCEHMLFLGTAKYPSENEYFKFLTAHAGRANANTATDHTNY 111
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 502 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G+ HF E + F T K+ + + + L H G + + D T Y
Sbjct: 67 GLAHFCEHMLFLGTAKYPSENEYFKFLTAHAGRANANTATDHTNY 111
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 502 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 636
G+ HF E + F T K+ + + + L H G + S D T Y
Sbjct: 67 GLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNY 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,021,991
Number of Sequences: 27780
Number of extensions: 285470
Number of successful extensions: 827
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -