Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24b07
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    27   0.16 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    26   0.29 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    26   0.29 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.66 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.7  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   4.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.7  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   4.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
 Frame = +1

Query: 325 PCEKCKCSDGGGVQCEKQQCESRPGCKAVHRP-DHCCPTYQCDCEQEGRVYDNGEKLVDP 501
           P   C C  G     EKQ+C   P  K  H    H C    C    +   Y   E   DP
Sbjct: 243 PSGGCHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEA--CPAHSKSSDYGFTECRCDP 300


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 602 VDVVLNTTTVLSXG*PCFLASLPCRP 679
           +DVVLNT  +L+    C L   PC P
Sbjct: 33  IDVVLNTERLLNAYVNCLLDQGPCTP 58


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 602 VDVVLNTTTVLSXG*PCFLASLPCRP 679
           +DVVLNT  +L+    C L   PC P
Sbjct: 33  IDVVLNTERLLNAYVNCLLDQGPCTP 58


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +1

Query: 565 FVRDDCTPRLVPGRCCPEYDNCP 633
           F RD   P LV  R  P Y  CP
Sbjct: 192 FTRDKVAPILVRARETPNYTACP 214


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 424 HCCPTYQCDCE 456
           HCC    CDCE
Sbjct: 748 HCCDFDACDCE 758


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 332 RSASAPMEGGSNVRSSNANPGLAARLC 412
           RSA +  EG S+ +  N NP     +C
Sbjct: 13  RSAESEFEGASSPKKRNKNPQPKNAVC 39


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = -3

Query: 356 PPSEHLHFSQGSEPGNSSPGRYTTSPSAQLPSLSPKSTLVTFGSGPTGPPQ 204
           PP   L     +EPGN+ P  Y   P    P L  +       + P   PQ
Sbjct: 111 PPHPRLRREPEAEPGNNRP-VYIPQPRPPHPRLRREPEAEPGNNRPVYIPQ 160


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 323 SEPGNSSPGRYTTSPSAQLPSLSPKS 246
           S PG  S     +SPS+   S+SP S
Sbjct: 82  SYPGGGSSSPSPSSPSSFFSSVSPTS 107


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 422  SGRCTALQ-PGLDSHCCFSHWTPPPSE 345
            SG  T+++   LD H     W PPP E
Sbjct: 977  SGPPTSIRVDDLDQHTLKVTWKPPPRE 1003


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = -3

Query: 188 WNAASKMVENLGDAMSPFDLIMMFCN*IVIRRDWSVQFTALHDFQ 54
           W+  +++  N    ++  +  M+FCN + I R  +  +    +FQ
Sbjct: 324 WDTNTELNPNTFILVAENNTTMVFCNDLSIDRSTNTMYVLSDNFQ 368


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
 Frame = +1

Query: 322 DPCEKCKCSDGGGVQCEKQQCESRPGCKAVHRPDH----CCPTYQCDCEQ 459
           D C KCK        C   QC   P  +    P +    C    QC C +
Sbjct: 41  DSCHKCKYGIAMSSACGIVQCAKGPD-ELCGGPQNYLGICAEGMQCSCNK 89


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 666 RDARKHGYPXDRTVVVFRTTSTGHKPRSAVIS 571
           ++   H    +++VVV   T+T + P ++VIS
Sbjct: 817 KNINDHCVTTEQSVVVTNVTTTINTPTTSVIS 848


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 675 RQGRDARKHGYPXDR 631
           R+  DAR  GYP DR
Sbjct: 633 RKYPDARAMGYPFDR 647


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 335  FSQGSEPGNSSPGRYTTSPSAQLPSLSPKSTLV 237
            F+QG     SSPG    +  A   + SP ++LV
Sbjct: 907  FAQGFATAASSPGLLERASPAFSGTSSPTNSLV 939


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,780
Number of Sequences: 438
Number of extensions: 5480
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)