Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24b06
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   0.67 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.3  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    23   8.3  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 395 RLRISDVPLPHHLSVITGKIVEFI 466
           RL I D P PHH S++  ++V F+
Sbjct: 107 RLTIDDCPFPHHQSIL--QLVSFL 128


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  FGTSHFFSIPFFYAQHV 71
           FGT+H    P FYAQ+V
Sbjct: 71  FGTTHTQLPPQFYAQNV 87


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 345 VRGDIIEKQDDHRYV 301
           V G   EKQDDH YV
Sbjct: 40  VEGKHEEKQDDHGYV 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,186
Number of Sequences: 2352
Number of extensions: 13404
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)