Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24b01
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.5  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   5.9  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   7.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/48 (20%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 536  KMMENRIQYILSCFLVQK-APENNVQYTVVSYASKEPLEHSFLYYVAV 396
            K   N I++ L    +++  P++ +QY V  + + +P E+     + +
Sbjct: 1140 KNQRNCIEFALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYMIFVLIMI 1187


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 428 MVPSMHTRLRYIGHCSLEPSVPKNRKGYT 514
           ++P ++ +L Y   C++   V +NR   T
Sbjct: 62  VLPKLYAKLHYCVSCAIHSKVVRNRSKET 90


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 388 FHFKLRRSRWLSCTFTSHSLLI 323
           +H+K  R R+ +CT+   +L I
Sbjct: 56  YHYKNLRDRYTNCTYVDGNLEI 77


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 388 FHFKLRRSRWLSCTFTSHSLLI 323
           +H+K  R R+ +CT+   +L I
Sbjct: 16  YHYKNLRDRYTNCTYVDGNLEI 37


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 442 HRRNHWNTAFFIMWR 398
           H +NH   AF +MW+
Sbjct: 7   HNQNHCGAAFNLMWQ 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,935
Number of Sequences: 2352
Number of extensions: 11821
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)