Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24b01
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   2.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.6  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   9.6  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 28  CKITCVKCKIRLN*HYRNHRNSIK*KAQFARN 123
           C  TC KCKI  N   +  R ++K K   A++
Sbjct: 2   CYCTCEKCKITAN-RQQVMRQNMKLKRHLAQD 32


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 525 KSNPVYPFLFFGTEGSREQCP 463
           KSN  Y F F G +G   Q P
Sbjct: 280 KSNDYYAFHFEGEKGPNSQGP 300


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 482 PSVPKNRKGYTGFDFPSSSDEE 547
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 482 PSVPKNRKGYTGFDFPSSSDEE 547
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 482 PSVPKNRKGYTGFDFPSSSDEE 547
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 106 PFILLNFYDYDNVNLVLFYILHK 38
           PF+L N  ++  +    ++ LHK
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHK 263


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 106 PFILLNFYDYDNVNLVLFYILHK 38
           PF+L N  ++  +    ++ LHK
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHK 263


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 551 IPLHLKMMENRIQYILSCFLVQKAPENNVQ 462
           I L  +  E R+QY    +LVQ+  E   +
Sbjct: 25  IDLRSRTKEERLQYRREAWLVQQEREQEYE 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,008
Number of Sequences: 438
Number of extensions: 3638
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)