Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24a21
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 32 0.084
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.19
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 30 0.26
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 30 0.26
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 29 0.45
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.0
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 28 1.0
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 28 1.4
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 1.8
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 27 2.4
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 27 2.4
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 27 3.2
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 27 3.2
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 27 3.2
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 4.2
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 26 4.2
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 4.2
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 4.2
SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|c... 26 5.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 7.3
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 7.3
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 25 7.3
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 25 9.7
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.7
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 9.7
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 9.7
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 9.7
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 31.9 bits (69), Expect = 0.084
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 458 CSMEQMINIR--DQQEHLARLHFRLCADVDKPTEDNFENSASRDKMEQLVKSLEQLSNSI 631
C++ +M + ++++++ R + ++D+P E ++ DK E KSLE++S S+
Sbjct: 3 CNLAKMYEVEPSEKEDNVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSV 62
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.19
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Frame = +2
Query: 50 WKFRIFKIKNI*MSL---HLEEANETQQLMQNEGEDDEQKIPQSATSPVTS----NKISS 208
WK R + N + LEE + + ++ E ++ E K+ ++A T N ++
Sbjct: 1335 WKLRFQSVLNKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNE 1394
Query: 209 EAASLTSKNHEKVLTSTGNSLNESTKVSYVNERRLQR-DFMRSNYTNRPKNIPKETPDVK 385
E +L + + +T + + K + + L R ++ TN+ K + + + +
Sbjct: 1395 EVENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENE 1454
Query: 386 NMEKALLELLDDFHTGKLSAFGSG--CSMEQMINIRDQQE 499
M+K + L D H + SA + EQ ++ ++E
Sbjct: 1455 AMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKE 1494
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 30.3 bits (65), Expect = 0.26
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -3
Query: 630 IEFDNCSKLLTSCSILSL-----DAEFSKLSSVGLSTSAHKRKCNLAKCSC 493
+EF CS L +S ILS + E KL G+STSA + K A C C
Sbjct: 578 LEFQ-CSDLSSSIDILSKQDEEHEKEKRKLKDTGVSTSAEELKTFRAMCKC 627
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 101 EEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNES 280
E+ E ++ +QN+ QK S+ + SNK++ + +N EK + ++ + E
Sbjct: 42 EDEEENKESLQNDSHSVSQKSSSSSQNDQGSNKMTRIQQKIQERNFEKAIKASEAAAKEE 101
Query: 281 T 283
+
Sbjct: 102 S 102
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 29.5 bits (63), Expect = 0.45
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 134 NEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNESTKVSYVNERRL 313
NE + PQ T+ +S ISS + + G +LN + S+ ++
Sbjct: 261 NEPSAHSRPSPQGTTANSSSASISSLHNTTPDGEGKYRSVQNGRALNYVS--SFNSDSHS 318
Query: 314 QRDFMRSNYTNRPKNIPKETPDVKN 388
+D++ +YTN P + KE+ D N
Sbjct: 319 PKDYISQSYTNEP-GLKKESADSFN 342
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 101 EEANETQQLMQNEGEDDEQKIPQSATSPV------TSNKISSEAASLTSKNHEKVLTSTG 262
E+ N ++ + EG +++ +S+T+ TS ++ +A TS H+K TS+
Sbjct: 76 EKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQKPETSSQ 135
Query: 263 NSLNESTKVSYVNERRLQRD 322
+ + V VNE+ ++
Sbjct: 136 IGKDNAAPVENVNEKSTSQE 155
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 101 EEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNES 280
+ +E+ ++ NE + +IP+ T T+ E + + +L+ + ++ NES
Sbjct: 1285 QNLDESACVLTNESSLSQTEIPEEKTENETTAVNGFENSK--KRQFSSLLSGSIDTNNES 1342
Query: 281 TKVSYVN-ERRLQRDFMRSNYTNRPKNIPKETPDVKNME-KALLELL 415
KVS V ++ +D ++S T I K D+K+ E + L +LL
Sbjct: 1343 NKVSSVEFDKSGPQDIIQS-MTEATFEIEKNIQDLKSEEVQKLSDLL 1388
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/80 (18%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 386 NMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKPTEDNFE 565
N+E+ + + S+ +GC E + ++ + +++A+ H ++ + E+ F
Sbjct: 56 NIEEDYAKRMAKLSRTTFSSLETGCLKESVQVMKAEVDNMAKSHLQISQLLQDDVENAFT 115
Query: 566 NSAS--RDKMEQLVKSLEQL 619
A+ +DK + +V +E++
Sbjct: 116 RYAASLKDKKKMIVSGIEKV 135
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 257 TGNSL-NESTKVSYVNERRLQRDFMRSNYTNRPKNIPKET 373
TGN N S V ++ +RDF +N NRPK + ++T
Sbjct: 630 TGNIYSNNSPGVKALSSDNFKRDFGDTNAINRPKFVGQQT 669
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNH-EKVLTSTGNSLN 274
++E T+ ++ +DDE A SN +S E+ +H + V+ S GNS+
Sbjct: 344 VDEGTSTEANDESSEDDDEDNNTDEANEDAQSN-VSDESPKGEGSSHSDNVVLSDGNSVK 402
Query: 275 E 277
+
Sbjct: 403 K 403
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 254 STGNSL-NESTKVSYVNERRLQRDFMRSNYTNRPKN 358
+TGNS NE K S + + D+M SNYT N
Sbjct: 79 ATGNSTYNELVKTSMLYQSGEDSDYMPSNYTTSEGN 114
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 3.2
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 1/172 (0%)
Frame = +2
Query: 56 FRIFKIKNI*MSLHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKN 235
F I + K S + AN +L+ EG + +P S+ T+ E +
Sbjct: 23 FTIIRDKTKPRSEFIFYANRIIRLIVEEGLNH---LPVSSAKVTTAQNAEYEGVMFDGRI 79
Query: 236 HEKVLTSTGNSLNESTKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELL 415
+ G S+ + + + R + R T++P + P+ ++ K + LL
Sbjct: 80 CGVSIMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPE--DISKRYVLLL 137
Query: 416 DDFHTGKLSAFGSG-CSMEQMINIRDQQEHLARLHFRLCADVDKPTEDNFEN 568
D L+ GS C+ME +IN+ +QE + L+ + K D F N
Sbjct: 138 DPM----LATGGSAICAMEILINMGCKQEQIIFLNVIASPEGLKNVHDRFPN 185
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISS 208
LEE N + + + EDD+++ S+TS V + S+
Sbjct: 340 LEEKNASTKTENDSNEDDKEECQSSSTSSVPESTAST 376
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 26.6 bits (56), Expect = 3.2
Identities = 22/110 (20%), Positives = 41/110 (37%)
Frame = +2
Query: 101 EEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNES 280
E+ NE ++ ++ ++ K + +S T + T G++ +S
Sbjct: 99 EKNNEENNVVSSDSKEAITKESGAELESSEPASTNSNVGMTTRSGRQSPRTPIGSTTPKS 158
Query: 281 TKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHT 430
+ +R + +T R KN PK +P + E A E HT
Sbjct: 159 SHSPPSTRKRRGSVGTTATHTKRSKNAPKTSPKDASNETADQEKELSLHT 208
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 188 TSNKISSEAASLTSKNHEKVLTSTGNSLNESTKVSYVN 301
++NKIS +L+SK K TG + S YVN
Sbjct: 510 STNKISENPTTLSSKVENKNEPKTGENKEPSQTNEYVN 547
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/89 (21%), Positives = 39/89 (43%)
Frame = +2
Query: 95 HLEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 274
H +E ++L G D+ +K ++ + N+ + A S+ K+ + T +
Sbjct: 588 HFHSVSEIKKLPM--GTDELEKSMVRPSTAMYINRQNENAVSI-DKSRDLQGTVNTKEIR 644
Query: 275 ESTKVSYVNERRLQRDFMRSNYTNRPKNI 361
+ +SY N+R L D Y ++ N+
Sbjct: 645 SRSALSYQNDRPLATDLPSVIYNHKHPNV 673
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 394 LHVLNIWGFFWYVLGSISIIRAHKISLKTSFIYV 293
LH L +G Y+LGSI ++ ++SL + ++
Sbjct: 850 LHYLKYFGSNKYILGSILLVMMSQVSLASIHFWI 883
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/96 (21%), Positives = 37/96 (38%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNE 277
++E N+ +D++K + S + AA SK + V S +
Sbjct: 146 VKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAYNASKENASVADSRVTAEET 205
Query: 278 STKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVK 385
STK S ++D + + T + TPD+K
Sbjct: 206 STKPSEDLSSPTKKDLIDFSETRPLAQASRATPDIK 241
>SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 397 FLHVLNIWGFFWYVLGSISIIR 332
F + L ++ F W +LG ++IIR
Sbjct: 137 FWYALYLYPFIWIILGIVAIIR 158
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 7.3
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 TSPVTSNKISSEAASLTSKNHEK--VLTSTGNSLNESTKVSYV-NERRLQRDFMRSNYTN 346
++P N I SE ASL + HEK V+ + + +T + V N+ + R + N
Sbjct: 986 SAPPIINDIDSEIASLKKRIHEKSLVVNALEDKKLAATPANDVQNDSLIYRIKSVQDEIN 1045
Query: 347 RPKNIPKETPDVKNMEKALLEL 412
R + ++P+V +M L EL
Sbjct: 1046 R-LSTSNKSPEVASMNVRLEEL 1066
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 7.3
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 299 NERRLQRDF-MRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQM 475
NER L + +R+ N + + + + + L LL+ FH + F S S+ Q
Sbjct: 42 NERLLSENIDLRTTAINLEEQLETVQNENEENKTKLAALLNRFHE-ETDNFLSKLSLCQ- 99
Query: 476 INIRDQQEHLARLHFRLCADVDKPTEDNFENSASRDKMEQLVKSLEQLS 622
++ Q+ + L DVD +ED E S +D E + ++ +S
Sbjct: 100 ---QEIQDTFKPVEANLAYDVDTDSEDLDEESVVKDTEEIIEQAQHDVS 145
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 326 MRSNYTNRPKNIPKETPDVKNMEKALL 406
M NY N+P N PK+ K M LL
Sbjct: 124 MYDNYVNKPSNDPKQKNKQKLMISELL 150
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 191 SNKISSEAASLTSKNHEKVLTSTGNSL 271
+N ISSE S+ S N + +T NSL
Sbjct: 396 ANDISSEKQSIKSANEKAYVTPKSNSL 422
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.0 bits (52), Expect = 9.7
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +2
Query: 173 ATSPVTSNKISSEAASLTSKN----HEKVLTSTGNSLNESTKVSYVNERRLQRDFMRSNY 340
A SP K S+E +L + H K L G +L E K +N+R + SN
Sbjct: 2236 AYSPSIDEKQSNEPNTLLGETIDGLHRKRLNEEGITLEERQKPEILNQRAITVLNRVSNK 2295
Query: 341 TNRPKNIPKETPDV-KNMEKALLE 409
P++ DV +EK +L+
Sbjct: 2296 LTGRDFKPQQQLDVPSQVEKLILQ 2319
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 245 VLTSTGNSLNESTK--VSYVNERRLQRDFMRSNYTN----RPKNIPKETP 376
V+ + L+ TK +S+ +LQ+D + YTN R +PK+ P
Sbjct: 2548 VMNTFSELLSTLTKPLLSFYKSEKLQKDSATTGYTNDQDSRGSTVPKQDP 2597
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 594 CSILSLDAEFSKLSSVGLSTSAHKRKCNLAKCS 496
CS+L LDAE S + + K K LA C+
Sbjct: 886 CSLLGLDAELVSHSRIKGLSGGQKVKLVLAACT 918
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 338 YTNRPKNIP-KETPDVKNMEKALLELL 415
YTN +P KE PD+ ++K ++ELL
Sbjct: 309 YTNNMILVPIKEMPDLLKVQKQVVELL 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,560,918
Number of Sequences: 5004
Number of extensions: 51630
Number of successful extensions: 243
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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