Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24a21
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC108717-1|AAI08718.1| 274|Homo sapiens coiled-coil domain cont... 91 4e-18
BC080566-1|AAH80566.1| 237|Homo sapiens CCDC28A protein protein. 91 4e-18
BC013019-1|AAH13019.1| 130|Homo sapiens CCDC28A protein protein. 91 4e-18
BC004464-1|AAH04464.1| 162|Homo sapiens CCDC28A protein protein. 91 4e-18
AY167571-1|AAN87344.1| 274|Homo sapiens chemokine C-C motif rec... 91 4e-18
AL121834-1|CAI42866.1| 274|Homo sapiens coiled-coil domain cont... 91 4e-18
BC022848-1|AAH22848.1| 200|Homo sapiens coiled-coil domain cont... 83 6e-16
AL049795-5|CAB75616.1| 200|Homo sapiens coiled-coil domain cont... 83 6e-16
BC002462-1|AAH02462.1| 241|Homo sapiens CCDC28B protein protein. 75 2e-13
AL049795-4|CAI22057.1| 241|Homo sapiens coiled-coil domain cont... 75 2e-13
AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cycl... 33 0.90
L04510-1|AAA35940.1| 574|Homo sapiens nucleotide binding protei... 31 3.6
BC022510-1|AAH22510.1| 574|Homo sapiens tripartite motif-contai... 31 3.6
AF230399-1|AAG50178.1| 546|Homo sapiens tripartite motif protei... 31 3.6
AF230398-1|AAG50177.1| 569|Homo sapiens tripartite motif protei... 31 3.6
AF230397-1|AAG50176.1| 574|Homo sapiens tripartite motif protei... 31 3.6
BC022443-1|AAH22443.1| 192|Homo sapiens ZCCHC10 protein protein. 31 4.8
BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domai... 31 4.8
AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens ... 31 4.8
AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein. 30 6.4
BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2 (Dros... 30 8.4
>BC108717-1|AAI08718.1| 274|Homo sapiens coiled-coil domain
containing 28A protein.
Length = 274
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 171 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 230
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 231 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 261
>BC080566-1|AAH80566.1| 237|Homo sapiens CCDC28A protein protein.
Length = 237
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 134 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 193
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 194 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 224
>BC013019-1|AAH13019.1| 130|Homo sapiens CCDC28A protein protein.
Length = 130
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 27 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 86
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 87 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 117
>BC004464-1|AAH04464.1| 162|Homo sapiens CCDC28A protein protein.
Length = 162
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 59 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 118
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 119 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 149
>AY167571-1|AAN87344.1| 274|Homo sapiens chemokine C-C motif
receptor-like 1 adjacent protein.
Length = 274
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 171 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 230
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 231 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 261
>AL121834-1|CAI42866.1| 274|Homo sapiens coiled-coil domain
containing 28A protein.
Length = 274
Score = 90.6 bits (215), Expect = 4e-18
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKP 547
+ DV+ ME+ LL LL+DFH+GKL AFG+ CS+EQM ++R QE LARL+ L ++++
Sbjct: 171 DVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIEQMEHVRGMQEKLARLNLELYGELEEL 230
Query: 548 TEDNFENSASRDKMEQLVKSLEQLSNSIERLH 643
ED +AS +++L+ LE+L++SI++LH
Sbjct: 231 PEDK-RKTASDSNLDRLLSDLEELNSSIQKLH 261
>BC022848-1|AAH22848.1| 200|Homo sapiens coiled-coil domain
containing 28B protein.
Length = 200
Score = 83.4 bits (197), Expect = 6e-16
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 12/108 (11%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRL--CADV- 538
E DV ME LL LL+DFH+G+L AFG CS EQ+ ++R+ QE LARLHF L C +
Sbjct: 84 EVTDVYEMEGGLLNLLNDFHSGRLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEE 143
Query: 539 -DKPTEDNFENSASRDK--------MEQLVKSLEQLSNSIERLHCDXN 655
D+ ED ++ ++QL+ +LE LSNSI++LH N
Sbjct: 144 DDEEEEDGVTEGLPEEQKKTMADRNLDQLLSNLEDLSNSIQKLHLAEN 191
>AL049795-5|CAB75616.1| 200|Homo sapiens coiled-coil domain
containing 28B protein.
Length = 200
Score = 83.4 bits (197), Expect = 6e-16
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 12/108 (11%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRL--CADV- 538
E DV ME LL LL+DFH+G+L AFG CS EQ+ ++R+ QE LARLHF L C +
Sbjct: 84 EVTDVYEMEGGLLNLLNDFHSGRLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEE 143
Query: 539 -DKPTEDNFENSASRDK--------MEQLVKSLEQLSNSIERLHCDXN 655
D+ ED ++ ++QL+ +LE LSNSI++LH N
Sbjct: 144 DDEEEEDGVTEGLPEEQKKTMADRNLDQLLSNLEDLSNSIQKLHLAEN 191
>BC002462-1|AAH02462.1| 241|Homo sapiens CCDC28B protein protein.
Length = 241
Score = 74.9 bits (176), Expect = 2e-13
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRL--CADV- 538
E DV ME LL LL+DFH+G+L AFG CS EQ+ ++R+ QE LARLHF L C +
Sbjct: 84 EVTDVYEMEGGLLNLLNDFHSGRLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEE 143
Query: 539 -DKPTEDNFENSASRDK--------MEQLVKSLEQLSNSI 631
D+ ED ++ ++QL+ +LE LSNS+
Sbjct: 144 DDEEEEDGVTEGLPEEQKKTMADRNLDQLLSNLEDLSNSM 183
>AL049795-4|CAI22057.1| 241|Homo sapiens coiled-coil domain
containing 28B protein.
Length = 241
Score = 74.9 bits (176), Expect = 2e-13
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
Frame = +2
Query: 368 ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRL--CADV- 538
E DV ME LL LL+DFH+G+L AFG CS EQ+ ++R+ QE LARLHF L C +
Sbjct: 84 EVTDVYEMEGGLLNLLNDFHSGRLQAFGKECSFEQLEHVREMQEKLARLHFSLDVCGEEE 143
Query: 539 -DKPTEDNFENSASRDK--------MEQLVKSLEQLSNSI 631
D+ ED ++ ++QL+ +LE LSNS+
Sbjct: 144 DDEEEEDGVTEGLPEEQKKTMADRNLDQLLSNLEDLSNSM 183
>AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cyclic
nucleotide-gated channel beta subunit protein.
Length = 809
Score = 33.1 bits (72), Expect = 0.90
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +2
Query: 107 ANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAA-SLTSKNHEKVLTSTGNSLNEST 283
+N++QQ E E+K ++ ++PVTS + + L+ KN LT+ + N +
Sbjct: 34 SNQSQQTTAQEENKGEEKSLKTKSTPVTSEEPHTNIQDKLSKKNSSGDLTTNPDPQNAAE 93
Query: 284 KVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELL 415
V E++ + D + N P+N P P + A L L
Sbjct: 94 PTGTVPEQK-EMDPGKEG-PNSPQNKPPAAPVINEYADAQLHNL 135
>L04510-1|AAA35940.1| 574|Homo sapiens nucleotide binding protein
protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 398 ALLELLDDFHTGKLSAFGS-----GCSMEQMINIRDQQEHLARLHFRLCA 532
ALLELL+ G + +G+ G S E +I + + HLA ++ +CA
Sbjct: 94 ALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCA 143
>BC022510-1|AAH22510.1| 574|Homo sapiens tripartite
motif-containing 23 protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 398 ALLELLDDFHTGKLSAFGS-----GCSMEQMINIRDQQEHLARLHFRLCA 532
ALLELL+ G + +G+ G S E +I + + HLA ++ +CA
Sbjct: 94 ALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCA 143
>AF230399-1|AAG50178.1| 546|Homo sapiens tripartite motif protein
TRIM23 gamma protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 398 ALLELLDDFHTGKLSAFGS-----GCSMEQMINIRDQQEHLARLHFRLCA 532
ALLELL+ G + +G+ G S E +I + + HLA ++ +CA
Sbjct: 94 ALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCA 143
>AF230398-1|AAG50177.1| 569|Homo sapiens tripartite motif protein
TRIM23 beta protein.
Length = 569
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 398 ALLELLDDFHTGKLSAFGS-----GCSMEQMINIRDQQEHLARLHFRLCA 532
ALLELL+ G + +G+ G S E +I + + HLA ++ +CA
Sbjct: 94 ALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCA 143
>AF230397-1|AAG50176.1| 574|Homo sapiens tripartite motif protein
TRIM23 alpha protein.
Length = 574
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 398 ALLELLDDFHTGKLSAFGS-----GCSMEQMINIRDQQEHLARLHFRLCA 532
ALLELL+ G + +G+ G S E +I + + HLA ++ +CA
Sbjct: 94 ALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCA 143
>BC022443-1|AAH22443.1| 192|Homo sapiens ZCCHC10 protein protein.
Length = 192
Score = 30.7 bits (66), Expect = 4.8
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDD-EQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 274
L+E L Q+ GE + E+K + + VTS+ SS +S + + E TST +S
Sbjct: 78 LKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSE 137
Query: 275 ES 280
+S
Sbjct: 138 DS 139
>BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domain
containing 10 protein.
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDD-EQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 274
L+E L Q+ GE + E+K + + VTS+ SS +S + + E TST +S
Sbjct: 56 LKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSE 115
Query: 275 ES 280
+S
Sbjct: 116 DS 117
>AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ20094 fis, clone COL04320. ).
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 98 LEEANETQQLMQNEGEDD-EQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 274
L+E L Q+ GE + E+K + + VTS+ SS +S + + E TST +S
Sbjct: 56 LKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSE 115
Query: 275 ES 280
+S
Sbjct: 116 DS 117
>AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein.
Length = 1055
Score = 30.3 bits (65), Expect = 6.4
Identities = 31/150 (20%), Positives = 61/150 (40%)
Frame = +2
Query: 170 SATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNESTKVSYVNERRLQRDFMRSNYTNR 349
+A S + I + T K L + G+ LN K + L++ ++ R
Sbjct: 100 NALSAMEGKFIQLQEKQRTLKISHDALMANGDELNMQLKEQRLKCCSLEKQLHSMKFSER 159
Query: 350 PKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLC 529
I + + ++EK L +++ SAF + + + + + +A+L L
Sbjct: 160 --RIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALK 217
Query: 530 ADVDKPTEDNFENSASRDKMEQLVKSLEQL 619
+D+ TE RD+ E+LV+ +L
Sbjct: 218 SDLTDKTEILDRLKTERDQNEKLVQENREL 247
>BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2
(Drosophila) protein.
Length = 844
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +2
Query: 101 EEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNES 280
+E+ + ++ +N+G+ +E + Q + V+SN++S++ L+ + L+S SLN
Sbjct: 332 KESRRSAKIGKNKGKTEEPMLNQHSQLQVSSNRLSADVDPLSLQMDMLSLSSQTPSLNRD 391
Query: 281 TKVSYVNERRLQRDFMRSNYTNRP 352
E + M N T P
Sbjct: 392 PIWRSREEPYHYGNKMEQNQTQSP 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,698,026
Number of Sequences: 237096
Number of extensions: 1598008
Number of successful extensions: 4254
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4247
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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