Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24a21
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.64 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   3.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   3.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   6.0  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   6.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.0  

>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 98  LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKIS 205
           LEE  +  +L+  E    E+ + +   SP+T N+I+
Sbjct: 23  LEETQQALELINLENFFPEENVVEELLSPLTLNRIT 58


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 311 DVFHLRTTPSWIRLD 267
           D+ HLR T  W+R D
Sbjct: 218 DILHLRHTKIWLRPD 232


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/62 (20%), Positives = 28/62 (45%)
 Frame = +2

Query: 95  HLEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLN 274
           H++      ++M+ + + +EQ+  Q   S +T    S+++  L    + K    +    N
Sbjct: 166 HMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGPRNGKRKRKSSTIEN 225

Query: 275 ES 280
           ES
Sbjct: 226 ES 227


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 332 SNYTNRPKNIPKETPDVKNMEKALLELLDDFH 427
           S Y+  P  +PK  P      K  +  L D H
Sbjct: 370 STYSGSPTELPKHLPTSLTKSKMEVMELSDLH 401


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 573 AEFSKLSSVGLSTSAHKRK 517
           +EFSK+S V  STS   RK
Sbjct: 4   SEFSKISKVDRSTSPLPRK 22


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 79  IFNLKNSKLPKHAK 38
           +F+LKNSKL K  K
Sbjct: 156 VFDLKNSKLLKQVK 169


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 187 DRRSRTLWYLLFVIFTFI 134
           DRRSR ++ + F+IF  +
Sbjct: 445 DRRSRIVFPVAFIIFNIL 462


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 581 DKMEQLVKSLEQLSNSIERLHCD 649
           DKM+ LV+ L+     +  L CD
Sbjct: 42  DKMKTLVEELKSKPGKLVPLQCD 64


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 263 NSLNESTKVSYVNERRLQRD 322
           N LNE   +  + ERR+ RD
Sbjct: 97  NELNEMCPLEKLKERRIWRD 116


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +2

Query: 146 DDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNE 277
           D+  K P+  + P+ +N  +    S+  KN+       GN ++E
Sbjct: 188 DETAKKPRVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNGVHE 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,075
Number of Sequences: 438
Number of extensions: 3591
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)