Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24a18
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 283 7e-77
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 283 7e-77
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 283 7e-77
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 57 8e-09
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 57 8e-09
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.1
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 283 bits (694), Expect = 7e-77
Identities = 132/178 (74%), Positives = 148/178 (83%), Gaps = 2/178 (1%)
Frame = +1
Query: 73 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGL 600
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGL 178
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 283 bits (694), Expect = 7e-77
Identities = 132/178 (74%), Positives = 148/178 (83%), Gaps = 2/178 (1%)
Frame = +1
Query: 73 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGL 600
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGL 178
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 283 bits (694), Expect = 7e-77
Identities = 132/178 (74%), Positives = 148/178 (83%), Gaps = 2/178 (1%)
Frame = +1
Query: 73 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 252
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 253 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 426
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 427 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGL 600
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGL 178
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 73 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 213
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 277 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 441
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 442 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAK 537
E S+ + + EKR F+ + + +D +
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTE 213
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 73 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 213
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 277 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 441
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 442 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAK 537
E S+ + + EKR F+ + + +D +
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTE 213
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 79 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 207
+ YD I++G G + L+ +GKKV ++R GG + +
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 433 DQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP-STANMQSLYDKFGL 600
++KE +D + K+ + FL Y +DFQ A+ WK F + ++Q Y++ +
Sbjct: 253 EEKEEKVADWIQNCYKQPIKRFLEYFRDFQNV-AREWKYFKRLPSESLQDAYEEISI 308
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 426 YFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVS 277
YFGD + N T + L Q P ++ KQ + QK +N V + V+
Sbjct: 456 YFGDIVDWCNETGYSNLSNQFPSATQLAKQHG-DTYVFQKDQNSVLIAVN 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,421,367
Number of Sequences: 27780
Number of extensions: 311592
Number of successful extensions: 874
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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