Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24a13
         (247 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    25   0.18 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   3.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               19   6.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    19   9.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   9.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   9.1  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 24.6 bits (51), Expect = 0.18
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 52  NIGAV*NVGTHYLPNFKEPL 111
           ++GAV  VGT   P F+EPL
Sbjct: 456 DLGAVATVGTTVAPCFEEPL 475


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 137 NIFKLNGKNTLKIVF*WK 190
           +I   N  N+LK+++ WK
Sbjct: 19  DIHSRNLTNSLKVIYEWK 36


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +1

Query: 13  ECLNVGPRVRKCNN 54
           EC+N      KC N
Sbjct: 117 ECINANKSTDKCEN 130


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 180 KTILSVFFPFNLKILAFHRRFPVKRFFEVRKVMCPY 73
           KT+  V  PF+L I      F    ++++ K+   Y
Sbjct: 48  KTVSKVPGPFSLPIFGTRWIFSCIGYYKLNKIHDAY 83


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +1

Query: 100 KEPLYRKTAMKSQYFQVKRKKHTQNCFLVEVASKL 204
           KE   R  +  S+ F+V+   +TQ   +++   +L
Sbjct: 450 KEKFRRWVSTMSRPFEVRYDPYTQRVEILDSVDRL 484


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 78  DTLPSELQRTSLQENGDE 131
           D + +E    ++QENGD+
Sbjct: 354 DRIFAEYDIINIQENGDQ 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,484
Number of Sequences: 438
Number of extensions: 1140
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)