Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24a12
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian... 108 4e-24
U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian... 107 8e-24
AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 32 0.38
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 32 0.38
Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.66
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.0
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 29 3.5
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 29 3.5
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 4.7
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 6.2
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 8.2
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 27 8.2
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 27 8.2
>U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform a
protein.
Length = 198
Score = 108 bits (259), Expect = 4e-24
Identities = 64/166 (38%), Positives = 89/166 (53%)
Frame = +3
Query: 54 TNSLTVWDELTSPLNLVLIGVIVYLIYKIIKSNFESEANVXXXXXXXXKLRKDLTVAELK 233
T L+ W E T + L+ V+ + Y + +S A D+TV EL+
Sbjct: 15 TMDLSSWFEFTMYDAVFLVVVLGFFFYWLTRSEQPLPAPPKELAPLPMS---DMTVEELR 71
Query: 234 KYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEY 413
KYDG + + +L +NG I+DVTRGK FYGPG Y AG DATR L T A + E+
Sbjct: 72 KYDGVKNE-HILFGLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQNA-VSSEW 129
Query: 414 DDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDES 551
DD + + +DE +A EWE QF+ KY VGRL+K +Y + +S
Sbjct: 130 DDHTGISADEQETANEWETQFKFKYLTVGRLVKNSSEKADYGNRKS 175
>U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform b
protein.
Length = 183
Score = 107 bits (256), Expect = 8e-24
Identities = 63/163 (38%), Positives = 88/163 (53%)
Frame = +3
Query: 63 LTVWDELTSPLNLVLIGVIVYLIYKIIKSNFESEANVXXXXXXXXKLRKDLTVAELKKYD 242
L+ W E T + L+ V+ + Y + +S A D+TV EL+KYD
Sbjct: 3 LSSWFEFTMYDAVFLVVVLGFFFYWLTRSEQPLPAPPKELAPLPMS---DMTVEELRKYD 59
Query: 243 GTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDV 422
G + + +L +NG I+DVTRGK FYGPG Y AG DATR L T A + E+DD
Sbjct: 60 GVKNE-HILFGLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQNA-VSSEWDDH 117
Query: 423 SDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDES 551
+ + +DE +A EWE QF+ KY VGRL+K +Y + +S
Sbjct: 118 TGISADEQETANEWETQFKFKYLTVGRLVKNSSEKADYGNRKS 160
>AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical
protein H38K22.3 protein.
Length = 326
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = +3
Query: 216 TVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAA 395
T +L +DGT+ + LA+ G +++V K +YGPG Y FAG+DATR TG
Sbjct: 102 TPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDF-- 159
Query: 396 SENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVG 500
E+ L DE+ S ++W + ++Y +VG
Sbjct: 160 QESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVG 194
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 402 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 578
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 579 SW 584
W
Sbjct: 230 IW 231
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 402 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 578
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 579 SW 584
W
Sbjct: 230 IW 231
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 402 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 578
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 579 SW 584
W
Sbjct: 230 IW 231
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 402 NDEYDDVSDLGSDEIASAKEWEEQFREK-YDIVGRLLKLGETPKNYSDDESEDKKSQ*AN 578
+D +D + G D SAKE+ EQ +EK D + K G+ K + E K + +
Sbjct: 170 SDAFDSAKEHGEDAQESAKEYFEQAKEKASDALDSAQKHGDDAKESAQGYFEQAKDKSSE 229
Query: 579 SW 584
W
Sbjct: 230 IW 231
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 369 GLATGQVAASENDEYDDVSDLGSDE--IASAKEWEEQFREKYDIVGRLLKLG 518
G G+ A + ++ DDV ++ SDE ++ ++ EE+ E+ +I G+ K+G
Sbjct: 218 GEGKGKAAGEDEEDDDDVEEIPSDEEILSDFEDDEEEPAEELEIPGKSRKIG 269
>Z78064-4|CAB01507.1| 235|Caenorhabditis elegans Hypothetical
protein F57B1.7 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 481 SLNCSSHSLAEAISSEPRSLTSSYSSFSDAATCPVAKPLVASLP 350
SLN + L +I++ P+ L SS +S SDA++C + P S+P
Sbjct: 35 SLNALNSLLYGSINTSPQPLLSSPTS-SDASSCSPSMPFTPSIP 77
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 387 VAASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDKKS 566
VA+ ++ E +D + S EIA A+ + F + D++ + + K S+DE ED++
Sbjct: 946 VASEDDGEEEDPAAFSSKEIAEAEVRDSLFSQLQDVI---TEQHDNIKGTSEDEVEDRED 1002
Query: 567 Q 569
+
Sbjct: 1003 E 1003
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 387 VAASENDEYDDVSDLGSDEIASAKEWEEQFREKY 488
+A E + +D+SD+ D+ +A+E E+ RE+Y
Sbjct: 267 LADEEEENSNDISDIDDDDGITAEEQREEERERY 300
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 294 DVTRGKRFYGPGGPYSA--FAGKDATRGLATGQVAASENDEYDDVSDLG 434
D R KR Y P GPY + T AT AA + YD V+D G
Sbjct: 72 DNDREKRSYEPEGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNG 120
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +3
Query: 309 KRFYGPG---GPYSAFAGK-DATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQF 476
KR+ G G SAF K D + E +E DD + +E ASA+ E
Sbjct: 129 KRYGGAGVGKSLLSAFLAKGDVSDDSEDEDEDEEEAEEQDDTEEKKENEDASAEVVIENA 188
Query: 477 REKYDIVGRLLKLGETPKNYSDDESEDKKSQ 569
+K + G K G+ S +SE KKS+
Sbjct: 189 EDKEEEEGSPKKKGQKRCQKSPIQSEAKKSK 219
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 28.7 bits (61), Expect = 3.5
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +3
Query: 309 KRFYGPG---GPYSAFAGK-DATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQF 476
KR+ G G SAF K D + E +E DD + +E ASA+ E
Sbjct: 151 KRYGGAGVGKSLLSAFLAKGDVSDDSEDEDEDEEEAEEQDDTEEKKENEDASAEVVIENA 210
Query: 477 REKYDIVGRLLKLGETPKNYSDDESEDKKSQ 569
+K + G K G+ S +SE KKS+
Sbjct: 211 EDKEEEEGSPKKKGQKRCQKSPIQSEAKKSK 241
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 402 NDEYDDVSDLGSDEIASAKEWEEQFREKYDI 494
+D DDV D ASAK+W F +K ++
Sbjct: 969 DDTKDDVISFRVDNSASAKKWSAAFADKLEL 999
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 456 KEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDKKS 566
K +E+Q D+V RLL L +T YSD ++KKS
Sbjct: 1348 KMYEKQMAMFTDVVNRLLAL-DTISKYSDALCDEKKS 1383
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical
protein F10B5.4 protein.
Length = 426
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 489 DIVGRLLKLGETPKNYSDDESEDKKSQ*ANSW 584
DI +L K+ T SDDE EDK+S + W
Sbjct: 112 DINAKLSKVNLTSCVVSDDEDEDKRSYADSPW 143
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +3
Query: 414 DDVSDLGSDEIASAKEWEEQFREKYDIVGRLLKLGETPKNYSDDESEDK 560
+D + ++ + + + E R VGR++++G+ NY D+E+ ++
Sbjct: 205 EDARFVEEKDVKTLQNFVENVRNNVIGVGRVVEIGKDSDNYGDNENTNE 253
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 356 FTSKRRVWASRSIKSLASSNIKYNSIHSQKNSSVRLSS 243
F + ++ WA S + + S + YN +++Q +S +LS+
Sbjct: 768 FVNAKKTWALTSEQGIESLHSWYNKLNAQIRTSAKLST 805
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 489 DIVGRLLKLGETPKNYSDDESEDKKSQ*ANSW 584
DI +L K+ T SDDE EDK+S + W
Sbjct: 112 DINAKLSKVNLTSCVVSDDEDEDKRSYADSPW 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,499,380
Number of Sequences: 27780
Number of extensions: 226667
Number of successful extensions: 802
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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