BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23p21
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118666-1|AAM50035.1| 791|Drosophila melanogaster SD26855p pro... 29 5.0
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB... 29 5.0
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA... 29 5.0
U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi p... 29 6.6
BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p pro... 29 6.6
AY119580-1|AAM50234.1| 1005|Drosophila melanogaster LD09823p pro... 29 6.6
AL031581-6|CAA20885.1| 1133|Drosophila melanogaster EG:115C2.2,F... 29 6.6
AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA p... 29 6.6
>AY118666-1|AAM50035.1| 791|Drosophila melanogaster SD26855p
protein.
Length = 791
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 196 VVTEQMIKKI*NIVLVDRRIAAACFVAEGMKISIRSVHNIYYTEPFWREKCVSALDTQNS 375
+VT M+K+ ++V+ RRI+A+ F+ K +RS+ NI R+K V + Q+
Sbjct: 51 LVTNDMLKE--SVVIRFRRISASEFLLSHRKTFMRSIRNIMRC----RQKDVILITLQSD 104
Query: 376 FRRVETNETEN 408
+++ + N
Sbjct: 105 YQKASQHAVGN 115
>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
isoform B protein.
Length = 4705
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 196 VVTEQMIKKI*NIVLVDRRIAAACFVAEGMKISIRSVHNIYYTEPFWREKCVSALDTQNS 375
+VT M+K+ ++V+ RRI+A+ F+ K +RS+ NI R+K V + Q+
Sbjct: 3698 LVTNDMLKE--SVVIRFRRISASEFLLSHRKTFMRSIRNIMRC----RQKDVILITLQSD 3751
Query: 376 FRRVETNETEN 408
+++ + N
Sbjct: 3752 YQKASQHAVGN 3762
>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
isoform A protein.
Length = 4705
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 196 VVTEQMIKKI*NIVLVDRRIAAACFVAEGMKISIRSVHNIYYTEPFWREKCVSALDTQNS 375
+VT M+K+ ++V+ RRI+A+ F+ K +RS+ NI R+K V + Q+
Sbjct: 3698 LVTNDMLKE--SVVIRFRRISASEFLLSHRKTFMRSIRNIMRC----RQKDVILITLQSD 3751
Query: 376 FRRVETNETEN 408
+++ + N
Sbjct: 3752 YQKASQHAVGN 3762
>U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi
protein protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 455 MAQFMTMGGTWLISRKKQYITSKRPLFPTPKKFKAIPSASKIM 583
+A F+ GG +++ +QYI SK+PL K AI S ++
Sbjct: 314 LASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAIQVLSHVL 356
>BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p
protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 455 MAQFMTMGGTWLISRKKQYITSKRPLFPTPKKFKAIPSASKIM 583
+A F+ GG +++ +QYI SK+PL K AI S ++
Sbjct: 314 LASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAIQVLSHVL 356
>AY119580-1|AAM50234.1| 1005|Drosophila melanogaster LD09823p
protein.
Length = 1005
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 455 MAQFMTMGGTWLISRKKQYITSKRPLFPTPKKFKAIPSASKIM 583
+A F+ GG +++ +QYI SK+PL K AI S ++
Sbjct: 186 LASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAIQVLSHVL 228
>AL031581-6|CAA20885.1| 1133|Drosophila melanogaster
EG:115C2.2,FBgn0001341;l(1)1Bi protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 455 MAQFMTMGGTWLISRKKQYITSKRPLFPTPKKFKAIPSASKIM 583
+A F+ GG +++ +QYI SK+PL K AI S ++
Sbjct: 314 LASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAIQVLSHVL 356
>AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA
protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 455 MAQFMTMGGTWLISRKKQYITSKRPLFPTPKKFKAIPSASKIM 583
+A F+ GG +++ +QYI SK+PL K AI S ++
Sbjct: 314 LASFLVNGGKDMLAAWQQYIDSKQPLKLNAAKACAIQVLSHVL 356
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,183,493
Number of Sequences: 53049
Number of extensions: 595339
Number of successful extensions: 1445
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -