Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23p21
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z81476-10|CAN86579.1|  224|Caenorhabditis elegans Hypothetical p...    29   3.5  
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like nucl...    27   8.1  
AF101307-1|AAK84528.2|  294|Caenorhabditis elegans Serpentine re...    27   8.1  
AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical
           protein T14G10.7 protein.
          Length = 544

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +1

Query: 67  VNQDLRATFGVHDPPYSVPRWCA*FKR*RTSIDDDPRTGRPTSVVTEQMIKKI*NIVLVD 246
           +  D   + G H PP ++ +W     R R S+D+  R       + +Q+ +KI NIV+ D
Sbjct: 399 MGMDAELSHGWHRPPVAICQWEVARARLRASVDNAMRAASAVRAL-DQLAQKISNIVIND 457


>Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical
           protein C25F9.1 protein.
          Length = 431

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 346 IFHAKMVLYNKYYGHFL*KSSFLLLQNKQQQY 251
           IF AK+ ++  Y+G FL    FL+L NK+ +Y
Sbjct: 17  IFAAKLQIFISYFGVFLNILHFLMLSNKKLRY 48


>Z81476-10|CAN86579.1|  224|Caenorhabditis elegans Hypothetical
           protein C25F9.13 protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 346 IFHAKMVLYNKYYGHFL*KSSFLLLQNKQQQY 251
           IF AK+ ++  Y+G FL    F++L NK+ +Y
Sbjct: 17  IFAAKLQIFISYFGVFLNILHFIILCNKKLRY 48


>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
           protein R05D3.11 protein.
          Length = 1327

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 604 HHSSPKAHDLTSGWNRLKFLWSW--KQRSLRSYILFFPTYKPCSTHSHELS 458
           H +SP    L  GW R+ +  S   K+ +++  I++F    PC    H++S
Sbjct: 825 HRNSPIHTPLLCGWRRIMYTMSTGKKRGAVKKNIIYF---SPCGAALHQIS 872


>Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical
           protein Y57G11C.1 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 340 EKCVSALDTQNSFRRVETNETENLTKLF--WFVTTRSQPAYGSIHDYGWNMAYKSEKTV 510
           E+ +SA+ T  SF   E  E +  TK    WF  +      G+I++Y W +  +S+  +
Sbjct: 238 EEVLSAIRTVRSFA-AENFEQKRYTKNTEDWFKISTKTVTLGTIYNYFWALMLRSQDVI 295


>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical protein
            K04D7.5b protein.
          Length = 1287

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +1

Query: 277  EGMKISIRSVHNI--YYTEPFWREKCVSALDTQ-NSFRRVETNET-ENLTKLFWFVTTRS 444
            +  K++I  + +I  Y T    +E  +  L     SF   + N T E  TK F+ +  + 
Sbjct: 1121 QSYKVAIEMIMDIERYITAAKLKEPSLKGLFRYIQSFLEDKPNMTDEQATKRFYELFGQD 1180

Query: 445  QPAYGSIHDYGWNMAYKSEKTVYNFE 522
            +P +  +    W + YK+   + N+E
Sbjct: 1181 RPLWKKLESRFWCLPYKARPRLENYE 1206


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical protein
            K04D7.5a protein.
          Length = 1338

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +1

Query: 277  EGMKISIRSVHNI--YYTEPFWREKCVSALDTQ-NSFRRVETNET-ENLTKLFWFVTTRS 444
            +  K++I  + +I  Y T    +E  +  L     SF   + N T E  TK F+ +  + 
Sbjct: 1121 QSYKVAIEMIMDIERYITAAKLKEPSLKGLFRYIQSFLEDKPNMTDEQATKRFYELFGQD 1180

Query: 445  QPAYGSIHDYGWNMAYKSEKTVYNFE 522
            +P +  +    W + YK+   + N+E
Sbjct: 1181 RPLWKKLESRFWCLPYKARPRLENYE 1206


>AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 303 CP*YLLYRTILA*KM---CQRARYPEFFQT 383
           CP YLL  ++L+  M   C +  +PEFF T
Sbjct: 358 CPIYLLTASLLSAPMSLACSKIMFPEFFDT 387


>AF101307-1|AAK84528.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein31 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -3

Query: 231 VLNFFNHLFSHY*CRASCAGIVVNRSSSSLELSTPTRNRIWRIMNPKCCSQVLIY--HLR 58
           +L  F +L + Y  R     ++   +++ +E+S   R R W  +   CC  + I+   L 
Sbjct: 180 ILTLFMNLVTAYKGRKLSRALI---NAAGMEVSNVLRKREWNFVRQACCQGLSIFVGQLA 236

Query: 57  SHFF 46
            +FF
Sbjct: 237 CYFF 240


>AF016413-3|AAB65256.3|  555|Caenorhabditis elegans Hypothetical
           protein F27E11.2a protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 303 CP*YLLYRTILA*KM---CQRARYPEFFQT 383
           CP YLL  ++L+  M   C +  +PEFF T
Sbjct: 338 CPIYLLTASLLSAPMSLACSKIMFPEFFDT 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,663,047
Number of Sequences: 27780
Number of extensions: 315050
Number of successful extensions: 764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)