Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23p07
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0144 - 7153464-7153822,7153933-7154837,7155962-7156224           31   1.1  
03_06_0565 + 34747278-34748066,34748170-34748406,34749777-347498...    30   2.0  
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    29   4.5  
07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406...    28   7.9  
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789...    28   7.9  

>02_02_0144 - 7153464-7153822,7153933-7154837,7155962-7156224
          Length = 508

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 323 PIRRPERQLLLRRISDCDARSWKSAPTF 406
           P RRP  Q +LRR+  C AR W+  P F
Sbjct: 481 PQRRPSMQTVLRRLRQC-ARWWRRFPCF 507


>03_06_0565 +
           34747278-34748066,34748170-34748406,34749777-34749869,
           34751752-34751988,34752398-34752584,34752956-34753028,
           34753145-34753289,34753670-34753779,34754127-34754258,
           34754328-34754469,34754545-34754679,34756278-34756435,
           34757327-34757401,34757505-34757643,34757838-34757952,
           34758016-34758107,34758500-34758613
          Length = 990

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 378 PDPGSLPLLSQTPSLVVKCDQEGD 449
           P+P S P+LS  PS++ +C Q  D
Sbjct: 290 PEPFSRPILSANPSIIARCLQPSD 313


>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 187 CDPTLATEWLWLRFIDFVTAQETY 258
           C+  L T W WL   DF + + TY
Sbjct: 153 CENVLVTSWNWLYLADFASFKPTY 176


>07_01_0004 +
           35300-35533,35617-35732,39044-39287,39451-40578,
           40657-40833
          Length = 632

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 351 SCGGF--PTVTPDPGSLPLLSQTPSLVVKCDQEGDNTCKILCNALATATKAKGPEILCSR 524
           SCG     TVT  P   PL+ +T SLV +  +E   T   L  +  +A+  +   IL + 
Sbjct: 510 SCGPSMSATVTLLPSLKPLIPETESLVERSARE---TLMRLIASTPSASNPQLVNILPAV 566

Query: 525 LKDVNELKVR 554
           L DV E+ VR
Sbjct: 567 LTDVPEMNVR 576


>03_06_0662 +
           35377974-35378270,35378354-35378623,35378795-35378973,
           35380073-35380116,35380295-35380384,35380472-35380588,
           35380679-35380803,35380883-35381155,35381253-35381386,
           35381518-35381604,35381714-35381831
          Length = 577

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -3

Query: 351 SSCLSGLRMGRY*KSQLFSIVCLLVVYVSVLISF 250
           S  LS L++ +     LF  +CL+V+YV+V+ +F
Sbjct: 2   SGLLSALKLHQNCLKALFLWLCLMVIYVTVIHTF 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,514,617
Number of Sequences: 37544
Number of extensions: 310161
Number of successful extensions: 753
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)