Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23p07
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z75549-8|CAD60424.1|  297|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z68336-4|CAA92739.2|  269|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical
           protein F21G4.1 protein.
          Length = 640

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 351 SSCLSGLRMGRY*KSQLFSIVCLLVVYVSVLISFLGSDEINKSQPQ 214
           S+ L G  + RY  +   SI+CL+  ++ +L+S++    +  SQP+
Sbjct: 366 STALGGWILSRYNIAPRSSIICLIGSWIVILVSYIIGMNLGCSQPK 411


>AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical
           protein Y24D9A.6 protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 335 VFEWGDTKKVSYLVLYVCSLSMLVYL*VSWAVTKSINRN 219
           V ++G+ +K S  +  +C  S+ +Y    WA T  +++N
Sbjct: 55  VLKFGNCRKFSIFIKSICQFSISIYTSSVWAKTNVLSKN 93


>Z75549-8|CAD60424.1|  297|Caenorhabditis elegans Hypothetical
           protein T19C4.9 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 211 WLWLRFIDFVTAQETYKYTNIDNEQTYNTK*LTFLVSPH 327
           WL++  I F+    TYK   +++E  Y+T+ +  LV+P+
Sbjct: 131 WLFVVLIYFLPFLSTYKVVIMESEIRYSTRDIYVLVTPN 169


>Z68336-4|CAA92739.2|  269|Caenorhabditis elegans Hypothetical
           protein F22B3.7 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 356 ARAVAFPVFEWGDTKKVSYLVLYVCSLSMLVYL 258
           AR V + ++  GD  K+SY V Y C+ + L Y+
Sbjct: 70  ARHVNYNIYSDGDVWKMSYSVNYSCNKNFLGYV 102


>AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.10 protein.
          Length = 98

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -3

Query: 126 TTSASRK*LIPTNMRMQMSQKYTLKEPILCSFSMLN 19
           T SAS K L+    R Q     +L  PI C FS LN
Sbjct: 38  TLSASAKTLLIFKKRTQFLNSLSLPLPIWCLFSCLN 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,507,235
Number of Sequences: 27780
Number of extensions: 281999
Number of successful extensions: 699
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)