Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o21
         (150 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    25   7.3  
AL117195-6|CAB55013.2|  503|Caenorhabditis elegans Hypothetical ...    25   7.3  

>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 149 FFXDNNI*TIFYSHLYNYLYTVV-SFCIYRKVKLID 45
           FF DN     FY    N L  VV + C YRK+K ID
Sbjct: 430 FFSDNGN---FYEVKMNPLEEVVMTTCNYRKIKYID 462


>AL117195-6|CAB55013.2|  503|Caenorhabditis elegans Hypothetical
           protein Y57A10A.8 protein.
          Length = 503

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 33  VCKNIDKFYFSINTKTNHCV 92
           +C  +D F+FSIN KT   +
Sbjct: 418 LCTLLDAFFFSINQKTRSTI 437


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,667,992
Number of Sequences: 27780
Number of extensions: 31910
Number of successful extensions: 97
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 12,740,198
effective HSP length: 30
effective length of database: 11,906,798
effective search space used: 226229162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)