Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o19
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...   167   8e-42
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    64   6e-11
U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc seven...    29   3.8  
U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc seven...    29   3.8  
AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical ...    28   6.6  

>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score =  167 bits (405), Expect = 8e-42
 Identities = 72/141 (51%), Positives = 99/141 (70%)
 Frame = +2

Query: 224 IWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGV 403
           I+ LGK+ S    ++ +++ +TS  W TYR+ F PIG  G ++D+GWGCMLRC QM+LG 
Sbjct: 37  IFALGKEISKEDGIEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGE 96

Query: 404 ALVRVHLSVDWVWSPETRDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPN 583
            L+R H+   + W  E     Y KI+Q F + K A YSIHQ+A MG +EGKEV +WFGPN
Sbjct: 97  VLLRRHIGRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPN 156

Query: 584 TIAQVLKKLTVYDKWSSLAIH 646
           T AQV+KKLT++D WS++A+H
Sbjct: 157 TAAQVMKKLTIFDDWSNIAVH 177


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 25/150 (16%)
 Frame = +2

Query: 233 LGKKYSAIQDLDRIRR-------DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQM 391
           LG++YS   D   +R        D  S +W TYR  F  + D   T+D GWGCM+R  QM
Sbjct: 151 LGRRYSTSVDESGLRSGFENFCSDYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQM 210

Query: 392 VLGVALVRVHLSVDWVWSPETR------------DPTYLK---IIQRFEERKQAPYSIHQ 526
           ++  A++      DW ++   R            D   ++   I++ FE++  AP  IH+
Sbjct: 211 MVAQAIMVNRFGRDWRFTRRKRSHVAAHGDEDDFDREKIQEWMILKLFEDKPTAPLGIHK 270

Query: 527 ---VALMGASEGKEVGQWFGPNTIAQVLKK 607
              +A MG  + K VG W+ P+    ++KK
Sbjct: 271 MVGIAAMGKGK-KAVGSWYSPSEAVFIMKK 299


>U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical
           protein F48E8.3 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -2

Query: 426 DKCTLTRATPNTICPHRNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSK 262
           D   + RA    I    NIQ HP + V P  P     FL    I    +LLI SK
Sbjct: 237 DGVKIARALGAKIIGMENIQIHPTAFVDPKDPSAGTKFLAAEAIRGKGALLINSK 291


>U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 586 CIRSKPLANFFSFRGTHQCHLMDRI 512
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 586 CIRSKPLANFFSFRGTHQCHLMDRI 512
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical
           protein Y39E4B.4 protein.
          Length = 223

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 294 IDVISLLIRSKSCIALYFFPSTQILSFVLGISLGSTLL 181
           + VI  +IRSK  +A YF     ++ F+L I++G T+L
Sbjct: 87  VGVIGAVIRSKYLLAPYFL--FMVILFLLEIAIGITVL 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,445,937
Number of Sequences: 27780
Number of extensions: 351132
Number of successful extensions: 908
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)