Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23o11
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1195 - 34898383-34899034,34899123-34899220,34899326-34899334 113 8e-26
10_08_0346 + 17031694-17032030,17032164-17032615 85 4e-17
02_05_0175 + 26490186-26490303,26490954-26491184,26491326-264914... 46 2e-05
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 43 2e-04
06_01_0576 - 4073261-4073821,4073891-4074145 38 0.006
10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964 38 0.008
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 36 0.020
03_02_0032 + 5143223-5143238,5143477-5143526,5144077-5144173,514... 29 2.3
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319... 28 5.2
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 28 6.9
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 28 6.9
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 28 6.9
04_04_1372 + 33008740-33009130,33009485-33011544 27 9.1
>02_05_1195 - 34898383-34899034,34899123-34899220,34899326-34899334
Length = 252
Score = 113 bits (273), Expect = 8e-26
Identities = 56/125 (44%), Positives = 79/125 (63%)
Frame = +2
Query: 71 MASDTSTVVELYIYDLTHGVASLLAPTIIGRDVEGIWHTAIVAYDREFFYGANGITSCTP 250
MA + VV L +YDL++G+A L+ + +G+ +E IWHT +V Y E+F+G GI S
Sbjct: 1 MAEEGYKVV-LNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFG-GGIQSLAA 58
Query: 251 GTTQLGPPHRVQRLGETFVPFAVFVEYLQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFLC 430
G T G P RV +GET +P VF +YL+ ++ Y Y LL HNCN+FS+EVA+FL
Sbjct: 59 GRTPYGRPVRVVEMGETHIPREVFEDYLRDIS-PRYTAETYRLLSHNCNNFSNEVAQFLV 117
Query: 431 DARVP 445
A +P
Sbjct: 118 GAGIP 122
>10_08_0346 + 17031694-17032030,17032164-17032615
Length = 262
Score = 85.0 bits (201), Expect = 4e-17
Identities = 40/91 (43%), Positives = 57/91 (62%)
Frame = +2
Query: 182 HTAIVAYDREFFYGANGITSCTPGTTQLGPPHRVQRLGETFVPFAVFVEYLQGLAGSTYL 361
HT +V Y +E+F+G GI PG T G P RV+ LG T VP +F ++LQ + Y
Sbjct: 8 HTGVVVYGKEYFFGG-GIQKDHPGRTPYGTPVRVEDLGVTHVPREIFEDFLQDI-NPRYT 65
Query: 362 PSQYNLLEHNCNHFSDEVAEFLCDARVPKDI 454
P+ YNLL +NCN+F++E A+FL + +P I
Sbjct: 66 PANYNLLSNNCNNFTNEAAQFLVGSAIPSYI 96
>02_05_0175 +
26490186-26490303,26490954-26491184,26491326-26491406,
26491557-26491684
Length = 185
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 83 TSTVVELYIYDLTHGVASLLAPTIIGRDVEGIWHTAIVAYDREFFYGANGITSCTPGTTQ 262
T+T V L +YDLT L +G G++H+ I + E+ +GA+ S +
Sbjct: 8 TATPVLLNVYDLTPANDYLYW---LGF---GVFHSGIEVHGMEYGFGAHDFPSSGVFEVE 61
Query: 263 LGP-PHRVQR----LGETFVPFAVFVEYLQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFL 427
P + R LG T + + +++ LAG Y + Y+L+ NCNHF+D+V F
Sbjct: 62 SKSCPGFIYRKTVWLGTTDMSHGEYRSFIEKLAGK-YHGNSYHLVSKNCNHFTDDVCSFF 120
Query: 428 CDARVPKDI 454
D +P+ +
Sbjct: 121 -DCLLPESV 128
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Frame = +2
Query: 173 GIWHTAIVAYDREFFYGANGITSCTPGTTQLGP---PHRVQR----LGETFVPFAVFVEY 331
GI+H+A+ + E+ +GA+ T G ++ P P + R +G T + F ++
Sbjct: 47 GIFHSAVEVHGSEYSFGAHDHP--TSGVFEVEPKCCPGFMYRCSIFIGRTSLNPLEFRDF 104
Query: 332 LQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFLCDARVP 445
+Q +A S Y Y+L+ NCNHF+D+++ L +P
Sbjct: 105 IQRMA-SEYHGDTYHLISKNCNHFTDDLSTRLTGKPIP 141
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Frame = +2
Query: 74 ASDTSTVVELYIYDLT--HGVASLLAPTIIGRDVEGIWHTAIVAYDREFFYGAN-----G 232
+S +S+ V L +YD+T +G A L + V+G++ + + + YGA+ G
Sbjct: 39 SSSSSSPVYLNVYDVTPANGYARWLGLGVYHSGVQGMY-ALLSSPSILYAYGAHDGAGSG 97
Query: 233 ITSCTPGTTQLGPPHRVQRLGETFVPFAVFVEYLQGLAGSTYLPSQYNLLEHNCNHFSDE 412
I P +G T + A + LA + YNL+ NCNHF D
Sbjct: 98 IFEVAPRRCPGYAFREAILVGTTELTRAEVRAVMADLAAD-FPGDAYNLVSRNCNHFCDA 156
Query: 413 VAEFLCDARVPK 448
L AR+P+
Sbjct: 157 ACRRLVRARIPR 168
>10_08_0743 + 20249478-20250021,20250673-20250740,20250923-20250964
Length = 217
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +2
Query: 212 FFYGANGITSCTPGTTQLGPPHRVQRLGETFVPFAVFVEYLQGLAGSTYLPSQYNLLEHN 391
F +G+ SC G + LGET A L+ L+ + Y+LL N
Sbjct: 105 FCENGSGVFSCPIGKNPMYTYRECIVLGETECSIATVNRILRELSRE-WPGHSYDLLSRN 163
Query: 392 CNHFSDEVAEFLCDARVP 445
CNHF D + E L ++P
Sbjct: 164 CNHFCDVLCERLAVPKLP 181
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 173 GIWHTAIVAYDREFFYGANGITSCTPGTTQLGP---PHRVQR----LGETFVPFAVFVEY 331
GI+H+ I + E+ +GA+ T G Q+ P P + R +G T + + +
Sbjct: 70 GIFHSGIEVHGMEYGFGAHEYP--TSGVFQVEPKSCPGFIFRRSVCVGSTDMSRSEVRSF 127
Query: 332 LQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFLCDARVP 445
++ LA Y Y+L+ NCNHF+ ++ + L +P
Sbjct: 128 IEDLA-EDYHGDTYHLIAKNCNHFTADICKRLTGKPIP 164
>03_02_0032 +
5143223-5143238,5143477-5143526,5144077-5144173,
5145272-5145559,5146161-5146402
Length = 230
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 323 VEYLQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFLCDARVPK 448
V L Y Y+L+ NCNHF ++ L ++PK
Sbjct: 101 VRQFMELQSVNYNGDTYHLITKNCNHFCKDMCYKLTGNKIPK 142
>01_05_0679 +
24230740-24230929,24231330-24231461,24231710-24231977,
24232170-24232388,24233538-24233673,24233899-24234147,
24234783-24235100
Length = 503
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 80 DTSTVVELYIYDLTHGVASLLAPTIIGRDVEGIWHT 187
D + VE Y+ + HGV S +A I VEG W T
Sbjct: 405 DVANAVECYMKE--HGVTSDVAEAEISEMVEGAWRT 438
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 150 LSLAATWKAYGTQPSWRTTGSSSTGPMASPVALRAPRSWARRTACSVWG 296
LS A +W G R +SS P+ S A P +W V G
Sbjct: 95 LSCARSWSTCGKSSKQRGRNNSSVTPVFSLAARSGPNAWCGVAQAPVGG 143
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 142 GTYYHWPRRGRHMAHSHRGVRQGVLL 219
G YH R G HMA+ + G R ++L
Sbjct: 246 GVLYHDARGGSHMAYLNHGARNEIIL 271
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/51 (19%), Positives = 24/51 (47%)
Frame = +2
Query: 302 FVPFAVFVEYLQGLAGSTYLPSQYNLLEHNCNHFSDEVAEFLCDARVPKDI 454
F P + + + S++L +++ +CN +D +A C++ D+
Sbjct: 369 FAPLGTLLFEAKNIIASSFLTCKFSFCPRDCNKLADAIASIGCNSPPNTDL 419
>04_04_1372 + 33008740-33009130,33009485-33011544
Length = 816
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 252 APRSWARRTACSVWGRPLC 308
APRSW R C +W R C
Sbjct: 53 APRSWGRGDDCCLWERVNC 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,742,425
Number of Sequences: 37544
Number of extensions: 279618
Number of successful extensions: 1045
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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