Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o10
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    31   1.6  
AE014296-1386|AAF50475.2|  491|Drosophila melanogaster CG7476-PA...    29   3.7  
AE014296-1385|AAO41271.1|  475|Drosophila melanogaster CG7476-PB...    29   3.7  
AE014134-2743|AAS64715.1|  241|Drosophila melanogaster CG4711-PA...    29   4.9  
AY069593-1|AAL39738.1| 1427|Drosophila melanogaster LD34192p pro...    29   6.5  
AE014298-662|AAF45974.2| 1427|Drosophila melanogaster CG2984-PA ...    29   6.5  

>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
           isoform B protein.
          Length = 1740

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -3

Query: 465 SYVASVRGPGTDGYQERGASSNQVDRRLSAHGGKSLDAEGGGPHS*VISSKSQFYSTTA- 289
           S   S  GPG+       A+SN + RR SA    ++ + GGG  + V SS+ +  +T   
Sbjct: 261 SATGSASGPGSSATDSNNAASNMIMRRASA---CTMPSSGGGGGAGVGSSQREEATTPGE 317

Query: 288 APSFKLKR 265
           +P  +L R
Sbjct: 318 SPGGRLSR 325


>AE014296-1386|AAF50475.2|  491|Drosophila melanogaster CG7476-PA,
           isoform A protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 512 HFFRFPRVLDLSWITFHTWPPFEDLERM 429
           HFFR    L LS I++HTW     L R+
Sbjct: 288 HFFRMASNLWLSVISYHTWKVLTSLNRV 315


>AE014296-1385|AAO41271.1|  475|Drosophila melanogaster CG7476-PB,
           isoform B protein.
          Length = 475

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 512 HFFRFPRVLDLSWITFHTWPPFEDLERM 429
           HFFR    L LS I++HTW     L R+
Sbjct: 272 HFFRMASNLWLSVISYHTWKVLTSLNRV 299


>AE014134-2743|AAS64715.1|  241|Drosophila melanogaster CG4711-PA
           protein.
          Length = 241

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 342 GPHS*VISSKSQFYSTTAAPSFKLKRIPASRQVNTSSNY--ANYNFCEFDFY 193
           GP   + + + QF   T    FK ++IP ++  ++SS+Y  AN +   F  Y
Sbjct: 138 GPIKIIRNGRKQFPLITDPEFFKPRKIPRTKNSSSSSSYHTANSSISSFSLY 189


>AY069593-1|AAL39738.1| 1427|Drosophila melanogaster LD34192p protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 414  GASSNQVDRRLSAHGGKSLDAEGGGPHS*VISSKSQFYSTTAAPSFKLKRIPASRQVNTS 235
            G S+        A GG S  A    P S VI+S+     TTA+P+ +LKR    R+   S
Sbjct: 1236 GGSATPSSNSSPASGGSS-PAGFTSPASPVITSRGSGSRTTASPARRLKRSHEDREQRMS 1294


>AE014298-662|AAF45974.2| 1427|Drosophila melanogaster CG2984-PA
            protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 414  GASSNQVDRRLSAHGGKSLDAEGGGPHS*VISSKSQFYSTTAAPSFKLKRIPASRQVNTS 235
            G S+        A GG S  A    P S VI+S+     TTA+P+ +LKR    R+   S
Sbjct: 1236 GGSATPSSNSSPASGGSS-PAGFTSPASPVITSRGSGSRTTASPARRLKRSHEDREQRMS 1294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,451,562
Number of Sequences: 53049
Number of extensions: 630544
Number of successful extensions: 1792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)