Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o10
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    31   0.65 
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    31   0.65 
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    31   0.65 
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z29094-8|CAA82337.1|  254|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    29   2.6  
AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z92809-1|CAB07270.1|  286|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF022984-2|AAB69952.1|  521|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF016684-5|AAB66207.2|  297|Caenorhabditis elegans Hypothetical ...    27   8.0  

>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 485 DLSWITFHT-WPPFEDLERMGTRSVGRPPTRWTDDLVRTAGSR 360
           D  W T  T W P+        R VGRPP RWTD L +   +R
Sbjct: 823 DGRWTTLMTEWRPYG-----WKRPVGRPPMRWTDSLRKEITTR 860


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
            transcriptase protein.
          Length = 1066

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 485  DLSWITFHT-WPPFEDLERMGTRSVGRPPTRWTDDLVRTAGSR 360
            D  W T  T W P+        R VGRPP RWTD L +   +R
Sbjct: 998  DGRWTTLMTEWRPYG-----WKRPVGRPPMRWTDSLRKEITTR 1035


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 485 DLSWITFHT-WPPFEDLERMGTRSVGRPPTRWTDDLVRTAGSR 360
           D  W T  T W P+        R VGRPP RWTD L +   +R
Sbjct: 737 DGRWTTLMTEWRPYG-----WKRPVGRPPMRWTDSLRKEITTR 774


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 485 DLSWITFHT-WPPFEDLERMGTRSVGRPPTRWTDDLVRTAGSR 360
           D  W T  T W P+        R VGRPP RWTD L +   +R
Sbjct: 349 DGRWTTLMTEWRPYG-----WKRPVGRPPMRWTDSLRKEITTR 386


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
            F10F2.2 protein.
          Length = 1343

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 270  KRIPASRQVNTSSNYANYNFCEFDFYYAMSFFHCE 166
            K +  +R+V  +    NY  C+FD+YY  +F H E
Sbjct: 1031 KSLKEAREVRRTCQKINYK-CDFDWYYNPAFIHNE 1064


>Z29094-8|CAA82337.1|  254|Caenorhabditis elegans Hypothetical
           protein C07A9.10 protein.
          Length = 254

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 422 RSVGRPPTRWTDDLVRTAGSRWM 354
           R VG+PP RWTD L +   +R M
Sbjct: 15  RPVGKPPMRWTDSLRKEITTRDM 37


>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -3

Query: 324 ISSKSQFYSTTAAPSFKLKRIPASRQVNTSSNYANYNFCEFDFYYAMSFFHCEVIRKNW 148
           +SS SQF S+T AP+ +        Q +T   Y  +N    DF   M+F   + + K W
Sbjct: 79  LSSTSQFISSTNAPAPRSPENKIFPQNSTDCPYEQWNQVRTDFIPNMNFH--KKLSKKW 135


>AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical
           protein Y51F10.8 protein.
          Length = 204

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 494 RVLDLSWITF-HTWPPFEDLERMGTRSVGRPPTRWTDDLVRTAGSR 360
           R  D  W T  + W P ++      R VGRPP RW D L +   +R
Sbjct: 131 RRTDGRWTTLMNDWCPRDE-----KRPVGRPPMRWNDSLRKEVTTR 171


>Z92809-1|CAB07270.1|  286|Caenorhabditis elegans Hypothetical
           protein R17.1 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 476 TINLKLSEIGRNDSLYNILDIFHVKYKQLMHNQHFDIP*ISQSF 607
           +++ K+SEIG    L +ILDIFH +    +    +D   I + F
Sbjct: 69  SLSFKVSEIGLRKFLDHILDIFHQQKVSQLTISSYDYQSIIEEF 112


>Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical
           protein T07G12.12 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +2

Query: 377 ALSRRSTWLEDAPRSWYPSVPGPRTEATYEK*STINL--KLSEIGRNDSLYNILDIFHVK 550
           ++S  +T   D PR   P VP       Y+K  T+NL  K+SEIG ND   ++ + +  +
Sbjct: 48  SISSINTATVDTPRFSTPIVPNV---GLYQK-FTLNLSEKISEIGPNDENEDLKESYDQE 103

Query: 551 YKQLMHNQH 577
            ++ +++ H
Sbjct: 104 PEEELNSSH 112


>AF022984-2|AAB69952.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK488.5 protein.
          Length = 521

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 324 ISSKSQFYSTTAAPSFKLKRIPASRQVNTSSNYANYNFCEFDF 196
           +SS SQF S+T AP+ +        Q +T+  Y  +N    DF
Sbjct: 77  LSSTSQFISSTNAPALRSPENKIFPQNSTNCPYEEWNQVRTDF 119


>AF016684-5|AAB66207.2|  297|Caenorhabditis elegans Hypothetical
           protein F45C12.8 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 3   FNIHNFPYSVHFERTSCFCPRSISNVSI 86
           +  +N  + +H++R+S   PRS+SN+ +
Sbjct: 35  YRFYNGNHDLHYDRSSDLVPRSLSNMPL 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,869,055
Number of Sequences: 27780
Number of extensions: 334100
Number of successful extensions: 918
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)