Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o09
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical pr...   125   4e-29
U41012-1|AAA82294.3|  397|Caenorhabditis elegans Hypothetical pr...   123   1e-28
Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical pr...   113   1e-25
U41012-2|AAV28364.1|  411|Caenorhabditis elegans Hypothetical pr...   113   1e-25
U39647-1|AAA80375.2|  351|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm recept...    28   5.8  

>Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical
           protein C10C5.3 protein.
          Length = 399

 Score =  125 bits (301), Expect = 4e-29
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
 Frame = +2

Query: 209 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 388
           ++N  L I +  + N+ +I++ GG+Q NV+PE+F A  D+R+  ++D  E  N + +W  
Sbjct: 234 ESNPDLTIGDVTTLNV-NIVN-GGVQFNVIPEKFEAFVDIRLTPSIDFNEMRNKLDQWVK 291

Query: 389 EAGRGVTYEFEQKD--PYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 562
           +AG GVTYEF +       TP   DD   +W AF+ + ++       +   G TDSR +R
Sbjct: 292 DAGEGVTYEFSKHSDLKLVTPHTRDDP--FWVAFEDSLKQEKCKFTTEVLIGSTDSRIVR 349

Query: 563 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRAVAN 703
           E G+ A+ FSP+ NT    H HNE L   VF+ GI +YQ++I  VAN
Sbjct: 350 EAGVRAINFSPLINTPLLAHAHNEFLNEKVFLRGIEIYQTLINNVAN 396


>U41012-1|AAA82294.3|  397|Caenorhabditis elegans Hypothetical
           protein C06A6.4a protein.
          Length = 397

 Score =  123 bits (297), Expect = 1e-28
 Identities = 62/154 (40%), Positives = 89/154 (57%)
 Frame = +2

Query: 242 VSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFE 421
           V+T+   II+ GG+Q NVVPE+F A  D+R+    DL      + +W  EAG GVTYEF 
Sbjct: 243 VTTSNITIIN-GGVQVNVVPEKFEAYIDIRVTPLQDLDAVLARVDQWAKEAGEGVTYEFM 301

Query: 422 QKDPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGFSPIH 601
           Q   +   +     + +W A     ++ G   K + F G TDSR++R  GI A+GFSPI 
Sbjct: 302 QFSNFKLISPNTREDPFWAAIDDALQKEGCKYKKEIFIGATDSRFVRAQGIRAIGFSPII 361

Query: 602 NTTPALHEHNEHLGLDVFINGIAVYQSMIRAVAN 703
           NT   LH+HNE L    F+ G+ +Y+++I  +AN
Sbjct: 362 NTPSLLHDHNEFLNEKTFLRGVEIYETLINKLAN 395


>Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.4 protein.
          Length = 397

 Score =  122 bits (293), Expect = 3e-28
 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
 Frame = +2

Query: 266 ISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFEQKDPY--T 439
           I +GG+Q NV+PE+F A  D+R+  N D  E    + +W  +AG GVTYEF Q   Y   
Sbjct: 251 ILKGGVQFNVIPEKFEAYVDIRLTPNQDFGEIRAKLDQWVKDAGEGVTYEFSQHSDYKPV 310

Query: 440 TPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGFSPIHNTTPAL 619
           +P   DD   +W AF+ + ++       +   G TDSR++R+ G+PA+ FSP+ NT    
Sbjct: 311 SPHTRDDP--FWAAFEDSLKQENCEFTTEVCVGSTDSRFVRKAGVPAINFSPMINTPVRA 368

Query: 620 HEHNEHLGLDVFINGIAVYQSMIRAVAN 703
           H HNE L   VF+ G+ +++++I  + N
Sbjct: 369 HAHNEFLNEKVFLRGVEIFETLINNLGN 396


>Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.5 protein.
          Length = 397

 Score =  113 bits (272), Expect = 1e-25
 Identities = 54/165 (32%), Positives = 93/165 (56%)
 Frame = +2

Query: 209 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 388
           ++N +L + +  + N+ +I++ GG+Q NV+PE+F A  D+R+  + D  +   M+ +W  
Sbjct: 234 ESNPNLTLGDVTTLNV-NIVN-GGVQFNVIPEKFEAYVDMRLTPHEDFNKIREMLDQWAK 291

Query: 389 EAGRGVTYEFEQKDPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLREL 568
            AG GVTYEF Q       +     N +W AF+ +  +     +       TDSR++R  
Sbjct: 292 NAGEGVTYEFSQYSDQKPISAHTRDNSFWAAFEDSLNQENCKFEKGIMVASTDSRFVRYE 351

Query: 569 GIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRAVAN 703
           G+ ++ FSP+ NT    H+HNE+L   VF+ G+ +YQ++I  + N
Sbjct: 352 GVNSINFSPMINTPFLPHDHNEYLNEKVFLRGLEIYQTIINNLGN 396


>U41012-2|AAV28364.1|  411|Caenorhabditis elegans Hypothetical
           protein C06A6.4b protein.
          Length = 411

 Score =  113 bits (272), Expect = 1e-25
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
 Frame = +2

Query: 242 VSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFE 421
           V+T+   II+ GG+Q NVVPE+F A  D+R+    DL      + +W  EAG GVTYEF 
Sbjct: 243 VTTSNITIIN-GGVQVNVVPEKFEAYIDIRVTPLQDLDAVLARVDQWAKEAGEGVTYEFM 301

Query: 422 QKDPYTTPTQLDDANI--------------YWKAFKQTAEELGMSIKPQTFTGGTDSRYL 559
           Q       + +D                  +W A     ++ G   K + F G TDSR++
Sbjct: 302 QSTNPADKSTIDFETFSNFKLISPNTREDPFWAAIDDALQKEGCKYKKEIFIGATDSRFV 361

Query: 560 RELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRAVAN 703
           R  GI A+GFSPI NT   LH+HNE L    F+ G+ +Y+++I  +AN
Sbjct: 362 RAQGIRAIGFSPIINTPSLLHDHNEFLNEKTFLRGVEIYETLINKLAN 409


>U39647-1|AAA80375.2|  351|Caenorhabditis elegans Hypothetical
           protein C44E12.1 protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 431 PYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGI 574
           PY  PTQ D+ NIY         +L   +   T    TD    R LG+
Sbjct: 82  PYFPPTQ-DEQNIYGNGSNDAKGQLAAMVTAATIISKTDEDVARALGL 128


>Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical
           protein F09A5.3 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -1

Query: 187 NLLTCFIFK*ILYAYVGEATIINIVRHRRSEWDDRAKRNI-ENTNHVCCLRTII 29
           N+L     K +  A++ + TI N++R    EW +  K N  E   H+C ++  +
Sbjct: 61  NILKYSFMKEVEVAFMEQDTISNVLRGGHGEWCEMFKDNANEMDAHMCFIKNSV 114


>U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm receptor
           protein 136 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 205 VAQQRCNLLTCFIFK*ILYAYVGEATIINIVRHRRSEWDDRAKRNIENTNHVCCLRTII 29
           +A Q C+ L+   F  ILY  +   + IN +RH  S       R I     + C++TII
Sbjct: 206 IASQLCSFLSIISFLAILYCAISIYSTINSLRHNLSPKMLDVNRQIFK---MLCMQTII 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,969,827
Number of Sequences: 27780
Number of extensions: 334939
Number of successful extensions: 941
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)