Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o08
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   2.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.8  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   5.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 100 FYCYFVYNKVLTLIYKVTNIEGQPLCVLI 14
           F+C F  NK++ +I K+  ++ +   +LI
Sbjct: 95  FFCLFYQNKLIEVISKLHKLDNKLKHMLI 123


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 234 IDIEPCSDDDTVSSI 278
           ID   CS DDTV S+
Sbjct: 14  IDHNSCSSDDTVLSV 28


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 185 HKEQQHSEHNSYCVEQPHL*Y 123
           H ++QH +H+    +Q H+ Y
Sbjct: 170 HMQEQHPQHHQPHHQQQHMMY 190


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 185 HKEQQHSEHNSYCVEQPHL*Y 123
           H ++QH +H+    +Q H+ Y
Sbjct: 172 HMQEQHPQHHQPHHQQQHMMY 192


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 310  LRALESVLTQSPNINETRKLKSTTNISVNTRKNS 411
            L AL+ +  ++      R   +T+N SVN   N+
Sbjct: 991  LAALQKLCDKTETHTNNRTHSATSNSSVNANTNN 1024


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = +3

Query: 216 PVKNRRIDIEPCSDDDTVSSISPMSYSANNFIARARVSTHSKPKYKRDPEIEVDNEYIGE 395
           PV  RR++++ C+       I    +  + F++      H   KY  +PE    N Y+ E
Sbjct: 62  PVIERRLEVD-CN-------IGGYDFPKDTFLSLFIYGMHHNEKYFPEPEKFDPNRYLPE 113

Query: 396 H 398
           +
Sbjct: 114 N 114


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 100 FYCYFVYNKVLTLIYKVTNIE 38
           FY +FV  +V+ L Y    I+
Sbjct: 137 FYFWFVLKQVMFLCYSTYGIQ 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,348
Number of Sequences: 336
Number of extensions: 2087
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)