Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o08
         (477 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.8  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   4.1  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 77  IINKVTIKFKAALCFHIKDEAAPRSSCCVHYVVVLCARK 193
           +IN+  I  K  LCF+   +      C   YV   C RK
Sbjct: 364 VINREEIVRKHGLCFNCLRKGHSARECRSTYVCQQCKRK 402



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 221 YRAYSGQYVFFSHKEQQHSEHNSYCVEQPH 132
           Y A+  +Y+   H   + +E++S     PH
Sbjct: 703 YEAFMQEYITLGHMSVRENENSSDGYYMPH 732


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 200 YVFFSHKEQQHSEHNSYCVEQPHL*YEN 117
           ++ + H EQ  S+H SY  E+ +  ++N
Sbjct: 42  HLLYGHMEQFQSKHASYINEELYWEFKN 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,618
Number of Sequences: 2352
Number of extensions: 8457
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)