Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23o07
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical ...    45   4e-05
Z83103-8|CAE17765.1|  103|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83103-7|CAE17764.1|  103|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83103-6|CAD44104.1|  103|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF016424-6|AAB65333.1|  366|Caenorhabditis elegans Transforming ...    28   4.5  
Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical
           protein K01A2.5 protein.
          Length = 265

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 311 EEKVKVSGCNINYVKVGKGSHNLICLPGALGTIWTDYK-PXIEGIDKNDFTLVAWDPPGY 487
           E    +    I Y K G G + ++ + GA+G    D+    +     +  T+V  DPPGY
Sbjct: 8   ESSEHIKDTQIGYCKYGHGPNYILAICGAVGCYKKDWPLKLLSHFPPDQVTIVGIDPPGY 67

Query: 488 GKSRPP 505
           G SRPP
Sbjct: 68  GTSRPP 73


>Z83103-8|CAE17765.1|  103|Caenorhabditis elegans Hypothetical
           protein D1025.9 protein.
          Length = 103

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 361
           +CI     KC     P K+++ K++GCN  Y+ +G
Sbjct: 69  SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103


>Z83103-7|CAE17764.1|  103|Caenorhabditis elegans Hypothetical
           protein D1025.8 protein.
          Length = 103

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 361
           +CI     KC     P K+++ K++GCN  Y+ +G
Sbjct: 69  SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103


>Z83103-6|CAD44104.1|  103|Caenorhabditis elegans Hypothetical
           protein D1025.7 protein.
          Length = 103

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 361
           +CI     KC     P K+++ K++GCN  Y+ +G
Sbjct: 69  SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103


>AF016424-6|AAB65333.1|  366|Caenorhabditis elegans Transforming
           growth factor betafamily protein 2 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 43  NSQALLLNYYISKYIKCLFDEVECY*LSDNYRASE 147
           N  A+  N Y+S Y+K L+ ++E Y   +N+   E
Sbjct: 59  NGPAVKANNYVSTYMKRLYKQLENYEHGENHNEEE 93


>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 285 FACNILIQFVVRKIAFLSVISIFS 214
           F  ++ +QFV R +A+L+VIS+ S
Sbjct: 301 FENDVTVQFVHRNLAYLTVISVLS 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,152,239
Number of Sequences: 27780
Number of extensions: 198631
Number of successful extensions: 432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)