Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23n24
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein. 29 7.2
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 29 7.2
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 29 7.2
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 29 7.2
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 29 7.2
BC105917-1|AAI05918.1| 956|Homo sapiens TRPC4 protein protein. 29 9.5
BC105641-1|AAI05642.1| 977|Homo sapiens transient receptor pote... 29 9.5
BC104725-1|AAI04726.1| 977|Homo sapiens transient receptor pote... 29 9.5
AL354802-5|CAI15561.1| 977|Homo sapiens transient receptor pote... 29 9.5
AL354802-4|CAI15560.1| 804|Homo sapiens transient receptor pote... 29 9.5
AL354802-3|CAI15557.1| 893|Homo sapiens transient receptor pote... 29 9.5
AL354802-2|CAI15558.1| 828|Homo sapiens transient receptor pote... 29 9.5
AL138679-9|CAH70112.1| 977|Homo sapiens transient receptor pote... 29 9.5
AL138679-8|CAH70114.1| 804|Homo sapiens transient receptor pote... 29 9.5
AL138679-7|CAH70110.1| 893|Homo sapiens transient receptor pote... 29 9.5
AL138679-6|CAH70111.1| 828|Homo sapiens transient receptor pote... 29 9.5
AF421362-1|AAL24553.1| 804|Homo sapiens transient receptor pote... 29 9.5
AF421360-1|AAL24551.1| 982|Homo sapiens transient receptor pote... 29 9.5
AF421359-1|AAL24550.1| 893|Homo sapiens transient receptor pote... 29 9.5
AF421358-1|AAL24549.1| 977|Homo sapiens transient receptor pote... 29 9.5
AF175406-1|AAD51736.1| 977|Homo sapiens transient receptor pote... 29 9.5
AF063825-1|AAF22930.1| 828|Homo sapiens trp-related protein 4 t... 29 9.5
AF063823-1|AAF22928.1| 893|Homo sapiens trp-related protein 4 t... 29 9.5
AF063822-1|AAF22927.1| 977|Homo sapiens trp-related protein 4 p... 29 9.5
>BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein.
Length = 743
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +2
Query: 290 EDKSVRNSRGRPNARNT-------IVFSPQPKSTIAEFLSKHKKSQDNVSKASLQITETN 448
E++SV+ S P A T ++ P P T+ FL S+ V A Q+TET+
Sbjct: 7 EERSVQQSH--PTATTTPARPYPELISRPSPP-TMRWFLPDLPPSRSAVEIAPTQVTETD 63
Query: 449 DCEKYNLICG 478
+C ICG
Sbjct: 64 ECRLNQNICG 73
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 66 TQNI*RNILQKYLQKMKLDSGTVSTL 143
T +I R +LQ YL + +LD+GT T+
Sbjct: 401 TMDIGRTVLQNYLPRHRLDAGTFGTM 426
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +2
Query: 290 EDKSVRNSRGRPNARNT-------IVFSPQPKSTIAEFLSKHKKSQDNVSKASLQITETN 448
E++SV+ S P A T ++ P P T+ FL S+ V A Q+TET+
Sbjct: 599 EERSVQQSH--PTATTTPARPYPELISRPSPP-TMRWFLPDLPPSRSAVEIAPTQVTETD 655
Query: 449 DCEKYNLICG 478
+C ICG
Sbjct: 656 ECRLNQNICG 665
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 66 TQNI*RNILQKYLQKMKLDSGTVSTL 143
T +I R +LQ YL + +LD+GT T+
Sbjct: 401 TMDIGRTVLQNYLPRHRLDAGTFGTM 426
>AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming growth
factor beta binding protein 3 protein.
Length = 1256
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +2
Query: 290 EDKSVRNSRGRPNARNT-------IVFSPQPKSTIAEFLSKHKKSQDNVSKASLQITETN 448
E++SV+ S P A T ++ P P T+ FL S+ V A Q+TET+
Sbjct: 520 EERSVQQSH--PTATTTPARPYPELISRPSPP-TMRWFLPDLPPSRSAVEIAPTQVTETD 576
Query: 449 DCEKYNLICG 478
+C ICG
Sbjct: 577 ECRLNQNICG 586
>BC105917-1|AAI05918.1| 956|Homo sapiens TRPC4 protein protein.
Length = 956
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>BC105641-1|AAI05642.1| 977|Homo sapiens transient receptor
potential 4 protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>BC104725-1|AAI04726.1| 977|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AL354802-5|CAI15561.1| 977|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AL354802-4|CAI15560.1| 804|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 804
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 528 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 565
>AL354802-3|CAI15557.1| 893|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AL354802-2|CAI15558.1| 828|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 828
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 636 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 673
>AL138679-9|CAH70112.1| 977|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AL138679-8|CAH70114.1| 804|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 804
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 528 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 565
>AL138679-7|CAH70110.1| 893|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AL138679-6|CAH70111.1| 828|Homo sapiens transient receptor
potential cation channel, subfamily C, member 4 protein.
Length = 828
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 636 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 673
>AF421362-1|AAL24553.1| 804|Homo sapiens transient receptor
potential channel 4 zeta splice variant protein.
Length = 804
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 528 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 565
>AF421360-1|AAL24551.1| 982|Homo sapiens transient receptor
potential channel 4 epsilon splice variant protein.
Length = 982
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 706 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 743
>AF421359-1|AAL24550.1| 893|Homo sapiens transient receptor
potential channel 4 beta splice variant protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AF421358-1|AAL24549.1| 977|Homo sapiens transient receptor
potential channel 4 alpha splice variant protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AF175406-1|AAD51736.1| 977|Homo sapiens transient receptor
potential 4 protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AF063825-1|AAF22930.1| 828|Homo sapiens trp-related protein 4
truncated variant gamma protein.
Length = 828
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 636 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 673
>AF063823-1|AAF22928.1| 893|Homo sapiens trp-related protein 4
truncated variant beta protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
>AF063822-1|AAF22927.1| 977|Homo sapiens trp-related protein 4
protein.
Length = 977
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 KSHYQTQNI*RNILQKYLQKMKLDSGTVSTLSTEERYHE 167
+ H+Q Q + RN++++Y+ M D+ T L TEE + E
Sbjct: 701 RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGL-TEENFKE 738
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,240,120
Number of Sequences: 237096
Number of extensions: 907281
Number of successful extensions: 1654
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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