Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23n11
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 33 0.050
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 32 0.087
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 32 0.087
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 30 0.35
SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces p... 29 0.46
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 29 0.61
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.61
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 29 0.61
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 29 0.81
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 28 1.4
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.9
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 27 1.9
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 27 2.5
SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces... 27 2.5
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 27 3.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 26 4.3
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 26 5.7
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 5.7
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 26 5.7
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 5.7
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 26 5.7
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 25 7.6
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 7.6
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 25 7.6
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.6
SPBC1348.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 10.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 10.0
SPBPB2B2.15 |||conserved fungal protein|Schizosaccharomyces pomb... 25 10.0
SPAC8F11.07c |cdc24||DNA replication protein Cdc24|Schizosacchar... 25 10.0
SPAC977.05c |||conserved fungal protein|Schizosaccharomyces pomb... 25 10.0
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 32.7 bits (71), Expect = 0.050
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 284 EITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQ 445
+I ++ K + + SK+EKK +D+ +KKS+ +++E + S KK +
Sbjct: 448 DIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKK 501
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 31.9 bits (69), Expect = 0.087
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +2
Query: 284 EITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTV 463
++ LD L ++Q + L ++ K L + +KS+ER D +RS + +R
Sbjct: 133 KLRLDPLLAIKQQEQKQLQTLMEKRKYSLDSD--RKSKERRHRDRHHRSNQDRSRERS-- 188
Query: 464 QRAMDLDTKQHALMDSRRDHERYQAMNALEEWRQQTNKNDY 586
D +QH+ +R+H R N WR++T+ + Y
Sbjct: 189 ------DNEQHS--SDKREHSRRSYRNDRNNWRERTHNDRY 221
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 31.9 bits (69), Expect = 0.087
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = +2
Query: 269 IINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQ 445
I D+E+ +D+ EE + + + SK+EKK +++ +KS+++ D + +KKS+
Sbjct: 437 IDGDEEVDIDV----EETVETISEKPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSK 491
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 29.9 bits (64), Expect = 0.35
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +2
Query: 212 PFLFEVFLRYDVNISKSKCIINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKK 391
P +F F Y+ NIS ++D E ++ N W+ LE+ S+ + ++ + + KK
Sbjct: 387 PEMFPTFRVYEYNISDIANQLDDREELTEITSFN---WETLEEQ-SQSDYEIDKKKKKKK 442
Query: 392 SQERAKEDAENRSIKKSQL 448
+ K+ + ++IK L
Sbjct: 443 KNNKKKKKNKRKNIKPGPL 461
>SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 161
Score = 29.5 bits (63), Expect = 0.46
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +2
Query: 293 LDLLKNNEEQWDGLEKNLSK-EEKKVLRDEVYKKSQE---RAKEDAENRSIKKSQ--LDR 454
L++ ++EQ EK SK E+ V RDE+ ++ +E RA+E +N++I
Sbjct: 88 LEVAAEHKEQQKNREKKSSKFEQSGVSRDELLRQQEELLSRARERFKNQNIAHDNHTTTA 147
Query: 455 FTVQRAMDLDTKQH 496
V A + +TK++
Sbjct: 148 IPVPTASETETKEN 161
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 29.1 bits (62), Expect = 0.61
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Frame = +2
Query: 224 EVFLR-YDVNISKSKCIINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQE 400
E FL+ ++V K++ + DD I + ++ EE+ L +KEE++ R+E +++ E
Sbjct: 924 EEFLKQFEVTDYKAEDLNWDDIIPEEEMERIEEEERMLAAQRAKEEERERREEEERENDE 983
Query: 401 RAKEDAENR---SIKKSQLDRFTVQRAMDLDTKQHALMDSRRDHERYQAMNALEEWRQQT 571
R SI K Q R + R ++ A++ ER+ + E +
Sbjct: 984 DHPSRTYKRTTKSITKRQQRREEMVREKEIRLLYRAMIKFGLVDERFDTIVKEAELQATD 1043
Query: 572 NKNDYDVNESGVK 610
K Y ++ VK
Sbjct: 1044 PKRIYSLSADMVK 1056
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.61
Identities = 27/128 (21%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +2
Query: 209 KPFLFEVFLRYDVNISKSKCIINDDEITLDLLKNNEEQWDGLEK----NLSKEEKKVL-- 370
+P L+E L YD + + + +++DE LDL+ + + +G E++VL
Sbjct: 502 EPELYESGLEYDEDEEEDEEDVDEDE--LDLMTDEQRMEEGRRMFQIFAARLFEQRVLQA 559
Query: 371 -RDEVYKKSQERAKEDAENRSIKKSQLDRFTV-QRAMDLDTKQHALMDSRRDHERYQAMN 544
R++V ++ Q + E+ E + +K + + + ++ D K+ + + +R +A
Sbjct: 560 YREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAER 619
Query: 545 ALEEWRQQ 568
E+ Q+
Sbjct: 620 LAEQAAQK 627
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.61
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 335 EKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDR 454
EK+ K+EKK +D++ KKS+ +D+ + K+ D+
Sbjct: 142 EKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDK 181
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 28.7 bits (61), Expect = 0.81
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +2
Query: 284 EITLDLLKNNEEQWDGL--EKN--LSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLD 451
EI +++L+ E+ L EK+ +SK EK + R++ + E N + +K L
Sbjct: 330 EIEIEVLREKVEKLQALSDEKDFYISKLEKSLDRNDTTPVPSD---EKLSNYAAEKENL- 385
Query: 452 RFTVQRAMDLD-TKQHALMDSRRDHERYQAMNALEEWRQQTNKNDYDVNE 598
V R +L+ T + +++ RD+ER E Q+ +ND D ++
Sbjct: 386 ---VSRISELEHTIEQLTINNERDNERMSPAEFELETTQEVEENDSDSHD 432
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 257 KSKCIINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIK 436
K + +IN ++ ++ NEE W E + K K R V E+ K ++ + S K
Sbjct: 962 KQRELINAIDLEKYAIRGNEEDWKAAENQIQKTNGKGAR--VVSIKGEKRKNNSLDASDK 1019
Query: 437 KSQ 445
K++
Sbjct: 1020 KTK 1022
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 311 NEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMDLDTK 490
NEE D ++ +EE ++E+ + +E + D E + + ++ + R + ++ +
Sbjct: 645 NEESADEVDFQTEREENARKKEELRLRFEEEDRGDPEKKDVDWYTEEKEKIARQLVINRE 704
Query: 491 QHALMD--SRRDHERYQA 538
MD SR + E Y+A
Sbjct: 705 AFEDMDPESRAEIEGYRA 722
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +2
Query: 251 ISKSKCIINDDEITLDLLKNNEEQWDGLEKNLS------KEEKKVLRDEVYKKSQERAKE 412
+S+ I+N + L+ ++ N + +G K+ E KKV++ EV + AKE
Sbjct: 1462 LSEIMDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEEEMERKKVMQQEVLRLRSRIAKE 1521
Query: 413 DAENRSIKK 439
+N ++K
Sbjct: 1522 LQKNELLRK 1530
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 299 LLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAEN 424
LLK NE + D + K R+EV K ++R +ED ++
Sbjct: 121 LLKKNELEGDDATEKFVTSSYKKHREEVQKAIEDRKEEDEKS 162
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 353 EEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFT 460
EE++ +E Y++SQ+ + + EN + ++ RF+
Sbjct: 934 EERRRAEEEEYERSQQESSSNEENENASRTSGARFS 969
>SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 439 KSIRQVYSTKS-YGFR--YKTTC--SDGF*KRSREISSYECFGRVE 561
KSIR + K YGF Y+ C + GF R++ +S Y+ + RVE
Sbjct: 146 KSIRDMTDDKVIYGFSLSYRIMCRFNSGFFYRNKALSHYDYYWRVE 191
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 269 IINDDEITLDLLKNNEEQWDGLEKNL 346
I D + + LKN++ WDGL+KN+
Sbjct: 398 ITKDWKSKKEFLKNSKLGWDGLKKNI 423
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.3
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Frame = +2
Query: 278 DDEITLDLLKNNE----EQWDGLE--KNLSKEEKK--VLRD-EVYKKSQERAKEDAENRS 430
DDEI D+ +NN E D L+ ++L +EK+ V +D ++ E A E+ E
Sbjct: 4062 DDEIQPDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEAD 4121
Query: 431 IKKSQ-----LDRFTVQRAMDLDTKQHALMDSRRDHERYQAMNALEEWRQQTNKNDYDVN 595
+K + D +D D +Q D D E+ MN E+ ++ + + +
Sbjct: 4122 AEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEK---MN--EDGFEENVQENEEST 4176
Query: 596 ESGVK 610
E GVK
Sbjct: 4177 EDGVK 4181
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/48 (20%), Positives = 28/48 (58%)
Frame = +2
Query: 350 KEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMDLDTKQ 493
KE +K+ ++ + + Q+R KE+ + + +K + R ++ ++ + +Q
Sbjct: 125 KELEKLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQ 172
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +2
Query: 278 DDEITLDLLKN-----NEEQWDGLEKNLSKEEKKVLRDE 379
D++ +L++LK+ NE+ W G E+ L +E + + DE
Sbjct: 424 DNDFSLEILKSWFSLVNEDGWVGREQILGEEARSKVPDE 462
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 669 LCFFCTYFYFYRLIL 625
LCF C YF+ RL L
Sbjct: 450 LCFLCLYFFLIRLCL 464
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.7
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 278 DDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRF 457
D E TL++ + + L+KEEK+V R+E +R ++I++++ R
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEA-----KRMASKVLIKTIERTKRKRV 112
Query: 458 TVQRAMD---LDTKQHALM 505
T + +D ++TK+ A M
Sbjct: 113 TTVQGLDAFGIETKKAAKM 131
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 269 IINDDEITLDLLKNNEEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKK 439
++ND+E +L N E ++L K EKKV + E N+S+KK
Sbjct: 195 VLNDEETLHELFPNASEFT--CVRDLKKLEKKVKKRSDLGNKYESTLNSLINKSVKK 249
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 5.7
Identities = 18/86 (20%), Positives = 40/86 (46%)
Frame = +2
Query: 314 EEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMDLDTKQ 493
+++ G E NL K++ + DE+ + S+E E+ EN+ + + +DT +
Sbjct: 194 QDESQGTEINL-KQKIEEENDEILEDSKESKDENEENKETSTTNVAETDAPEEETVDTVE 252
Query: 494 HALMDSRRDHERYQAMNALEEWRQQT 571
+ D + + ++ A + QQ+
Sbjct: 253 E-IADEEKHSVKEESGEASPQSSQQS 277
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 242 DVNISKSKCIINDDEITLDLLKNNEEQWDGLEKNLSKEEKK 364
D++ S+ +N+ IT+D EEQ GLE+ ++E K
Sbjct: 726 DLSSSRELSNLNERSITID--PRAEEQAQGLEQEQGQDEAK 764
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 329 GLE-KNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMD 478
G+E K+ +++L+++ + ++A D + K QLDR + +AMD
Sbjct: 612 GVELKSTENRYRQLLQEKEEELEIQKAAVDESLLQLSKLQLDRNDIDQAMD 662
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 7.6
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Frame = +2
Query: 143 LNPGKHDKVDLFTTDSYIKAHFKPFLF--------EVFLRYDVNISKSKCIINDDEITLD 298
+N G ++ DL+ + + H PF+ E L + N S+ + DD I+ +
Sbjct: 428 INKGILERTDLYACGATLPPHLSPFVKVGENDYDPEAELSAEENDDVSEAL--DDNISGE 485
Query: 299 LL----KNNE----EQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAEN-RSIKKSQLD 451
+ KN+E EQ D E+ + ++++ + E K+++++ + KK Q D
Sbjct: 486 AVPISKKNDEPENVEQIDDAEEEDLEHQRELEAEAGGVAYSEYVKQNSKSAKKTKKRQRD 545
Query: 452 RFTVQRAMDLDTKQ-HALMDSRRDHERYQAM 541
T + + + K+ +M S + + Y +
Sbjct: 546 TLTAEEKEEKEAKELSKMMMSNKQRKLYSKL 576
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 314 EEQWDGLEKNLSKEEKKVLRDEVYKKSQERAKEDAENRSIKKSQLD 451
E+Q LE E++ +E +S+ERA++ AE I S+++
Sbjct: 508 EQQQIMLEARQKAIERRRNEEEELARSRERARKKAEEIKISSSKMN 553
>SPBC1348.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 203
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 234 RKTSKRNGLKCAFM*ESVVNKSTLSCFPGFNGILI 130
+ +S+ GL M ++ N +C PGF+ +L+
Sbjct: 135 QNSSRITGLSNQLMNSTLYNVQVATCTPGFSALLL 169
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 308 NNEEQWDGLEKNLSK-EEKKVLRDEVYKKSQERAKEDAENRSIKKSQLDRFTVQRAMD 478
+ E WD + + K +E+ + +YK+ Q+ +ED EN+ ++ Q R V + +
Sbjct: 483 SKNELWDSMMVSRMKTQEQSIELTRLYKQLQD-IEEDYENKLMRMEQQWREDVDQLQE 539
>SPBPB2B2.15 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 203
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 234 RKTSKRNGLKCAFM*ESVVNKSTLSCFPGFNGILI 130
+ +S+ GL M ++ N +C PGF+ +L+
Sbjct: 135 QNSSRITGLSNQLMNSTLYNVQVATCTPGFSALLL 169
>SPAC8F11.07c |cdc24||DNA replication protein
Cdc24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 501
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 398 ERAKEDAENRSIKKSQLDRFT 460
++ KED ENR ++KS+ FT
Sbjct: 8 KKIKEDLENRLVEKSKQPAFT 28
>SPAC977.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 204
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 234 RKTSKRNGLKCAFM*ESVVNKSTLSCFPGFNGILI 130
+ +S+ GL M ++ N +C PGF+ +L+
Sbjct: 136 QNSSRITGLSNQLMNSTLYNVQVATCTPGFSALLL 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,497,398
Number of Sequences: 5004
Number of extensions: 50409
Number of successful extensions: 189
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -