Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23n08
         (633 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0685 + 10401281-10401463,10403296-10403700                       30   1.8  
08_01_0038 - 282431-283954                                             29   3.1  
02_05_0436 - 28971733-28972020,28972178-28972525,28972738-289729...    29   4.1  
06_02_0172 + 12594542-12596083                                         28   5.4  
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004...    28   5.4  
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628...    27   9.4  

>03_02_0685 + 10401281-10401463,10403296-10403700
          Length = 195

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 444 LLSLKIYSTFRTNIWAMPFLHLY 376
           LLS+KIYS  R  IW  P ++ Y
Sbjct: 57  LLSMKIYSVVRKEIWYRPDMYFY 79


>08_01_0038 - 282431-283954
          Length = 507

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 195 SNRMDVDFIDYYRKIQRNFSTTKDNLASKCRICLNSG 305
           +N  + DFID    IQ+ +  TKDN+ +   +   +G
Sbjct: 273 NNDEESDFIDVLLSIQQEYGLTKDNIKANLVVMFEAG 309


>02_05_0436 -
           28971733-28972020,28972178-28972525,28972738-28972920,
           28973096-28973170,28973238-28973392,28973540-28974043,
           28975889-28975964
          Length = 542

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = -2

Query: 278 RSEIVFCCTKVPLDFTIVIDKIYIHSVGLT--MSHFHL--IK*CQHF*KLKL 135
           R + + CC + P DF+I +D+    S+ +   MSH HL  +K CQ+  KLK+
Sbjct: 2   RMKTLACCRRRPQDFSIDMDQEPDSSLEILKFMSHGHLNDLKSCQN--KLKI 51


>06_02_0172 + 12594542-12596083
          Length = 513

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 207 DVDFIDYYRKIQRNFSTTKDNLASKCRICLNSG--CVLITDNDNTKQLLETLQVLGDINI 380
           +  FID    IQ  +  TKDN+ +     L +G     I       +L++   V+G +  
Sbjct: 281 EAGFIDVLLSIQHEYGLTKDNIKANLAAMLMAGMDTSFIELEYAMAELMQKPHVMGKLQA 340

Query: 381 DEEKAWPK 404
           +  +  PK
Sbjct: 341 EVRRVMPK 348


>02_05_1230 -
           35099942-35100018,35100138-35100221,35100367-35100475,
           35100564-35100687,35101157-35101253,35101375-35101507,
           35101654-35101731,35101821-35101928,35102011-35102078,
           35102181-35102279,35102379-35102505,35102623-35102707,
           35103297-35103373,35103482-35103562
          Length = 448

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 290 NSAFRSEIVFCCTKVPLD 237
           N AF S+ V+CC K+ LD
Sbjct: 358 NEAFASQFVYCCNKLGLD 375


>10_08_0258 +
           16261454-16261540,16261636-16261712,16262734-16262818,
           16262931-16263057,16263147-16263245,16263343-16263410,
           16263514-16263621,16263727-16263804,16263921-16264053,
           16264138-16264234,16264465-16264588,16264668-16264776,
           16264899-16264982,16265071-16265180
          Length = 461

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 290 NSAFRSEIVFCCTKVPLD 237
           N AF S+ V+CC K+ LD
Sbjct: 360 NEAFASQYVYCCKKLGLD 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,886,259
Number of Sequences: 37544
Number of extensions: 237226
Number of successful extensions: 499
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)