Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23n08
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    29   2.1  
AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin...    29   2.1  
AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical ...    28   4.8  
AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 95  SRFVILK*NLHCTVISVFKNVGIILSNENGSSSIQPNGCRFYRL 226
           S F ++  NL    IS+   +G  ++++N +SS  P+G RFY L
Sbjct: 160 SFFTMICINLIFFPISIATYLGSDITSQNHTSSCDPDGVRFYYL 203


>AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin
           protein 10 protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 216 NLHPFGWIDDEPFSFDKIMPTF 151
           N +   W+DD P+ +D+I P+F
Sbjct: 222 NNYSLSWLDDSPWDYDRIDPSF 243


>AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical
           protein K04F1.14a protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 523 SCVSNISSLTGSFNISNDCFATFLNSITIIKNL*HISHKYLGHAFSSSIFISPKTCR 353
           S +SN+ S+TG+  + N    T L +++  KNL  I+ +       +SI  +PK  R
Sbjct: 94  SALSNLKSITGNLEVYN----TELQNLSFFKNLQTINGQLFQEFSITSIHDNPKLTR 146


>AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical
           protein K04F1.14b protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 523 SCVSNISSLTGSFNISNDCFATFLNSITIIKNL*HISHKYLGHAFSSSIFISPKTCR 353
           S +SN+ S+TG+  + N    T L +++  KNL  I+ +       +SI  +PK  R
Sbjct: 209 SALSNLKSITGNLEVYN----TELQNLSFFKNLQTINGQLFQEFSITSIHDNPKLTR 261


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
 Frame = +3

Query: 246 NFSTTKDNLASKCRICLNSGCVLITDNDNTKQLLETLQVLGDINIDEEKA-WPKY-LCEM 419
           +F    D L  +  I + +GC+++   DN       L  +GDI+       WP Y   ++
Sbjct: 275 SFPIPLDALIIRPLITIGTGCLMLISEDNAVLSNRVLTYIGDISYSLYLIHWPIYAYWKL 334

Query: 420 CYKFLMIVIEFRNVAKQSLEILKLPVKEEIFET 518
            YK  M ++    ++   L +L     E+ + T
Sbjct: 335 TYKDNMSLLIVALISSILLAVLVFETFEKWYLT 367


>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 369 DINIDEEKAWPKYLCEMCYKFLMIVIEFRNVAKQSLEILKLPVKEEIFETQELN 530
           ++N   E A   Y C +     +  +  R + +   E+L+LP K+EI  + EL+
Sbjct: 408 NLNCSPEAAAKAYECLVALHIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELS 461


>Z19154-3|CAA79555.1|  291|Caenorhabditis elegans Hypothetical
           protein C40H1.4 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 245 PLDFTIVIDKIYIHSVGLTMSHFHLIK*CQHF*KLKLQYNANFTLK 108
           P  +TI+  K + HS+ +++ +F LIK  Q F    ++    FTLK
Sbjct: 41  PQYWTILFQKYWYHSITISVLYFILIKVIQKF----MENRKPFTLK 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,307
Number of Sequences: 27780
Number of extensions: 254023
Number of successful extensions: 688
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)