Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23m23
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical pr... 32 0.32
AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical ... 32 0.32
AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical ... 32 0.32
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 5.3
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 9.2
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 9.2
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 9.2
>Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.3 protein.
Length = 208
Score = 60.9 bits (141), Expect = 8e-10
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +3
Query: 192 KPIIMVTGFGPFAN-HPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPAL 368
K ++VTGFGPF N S + L K I +L L +I V YE+V + VP L
Sbjct: 9 KKKVVVTGFGPFRGFEEENPSSIIIDELTKNGISG---VDLELHKITVAYEDVSKKVPEL 65
Query: 369 WETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANH 503
W H P L+IH+G + + E QA GY D PA++
Sbjct: 66 WNEHKPDLVIHLGAHPVEKTIKFEQQAFSNGYCSNDVNGCTPADN 110
>Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical
protein M04C9.2 protein.
Length = 248
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +3
Query: 177 LDFLFKPIIMVTGF-GPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDE 353
+D + +++T F G F + N S + L K+EIEN + + PV+YE V E
Sbjct: 39 VDHQYTRDVVITAFDGQFEDLDYNPSSVVIDELLKEEIEN---VRFTVHKFPVSYETVAE 95
Query: 354 FVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTAD 518
VP L E + P ++H+ S+ N + E +A GY + D P + +++
Sbjct: 96 KVPELREKY-PDEVLHLAAHSVKNRVLFEEKAFSDGYVKKDVNGFVPEGNTISSE 149
>Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical
protein F16H6.4 protein.
Length = 197
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 333 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 509
+YE VDE +P + + IH+G S N L + A+ GY D K P V
Sbjct: 67 SYEKVDE-IPEKIDAERIRYAIHLGSHSQKNVLQIFQSAYSDGYTEEDKNGKVPVGGKVK 125
Query: 510 TADGAVRIHTKLNVERICKEFND 578
A+ TK+N E + N+
Sbjct: 126 CAETETGFRTKINCENVVTAVNE 148
>Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +3
Query: 333 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 509
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 510 TADGAVRIHTKLNVERICKEFNDASPEDSTR 602
++ + + E + KE N+ D +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDK 160
>AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +3
Query: 333 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 509
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 510 TADGAVRIHTKLNVERICKEFNDASPEDSTR 602
++ + + E + KE N+ D +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDK 160
>AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical
protein F35F10.6 protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 315 LIEIPVTYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP 494
L ++ +Y NVD+ V + + + IH+ S+ N + + A GY + D P
Sbjct: 49 LFKMEESYINVDQVVQEIANIQS-RYAIHLSSHSLKNTIQIVRTAFPNGYTQNDKNGNVP 107
Query: 495 ANHVCTADGAVRI-HTKLNVERICKEFNDASPED 593
+ DG + T ++ E++ K+ + ED
Sbjct: 108 EGNKVKFDGDETVMKTTVDCEQLVKDIKEFMEED 141
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 483 DKCPANHVCTADGAVRIHTKLNVERIC 563
D CP H CTA G+V I L ++ IC
Sbjct: 965 DDCPEFHKCTAQGSVSICCGLEIQDIC 991
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 423 NELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVRIHTKLNVERI 560
N LT EV+A DY D CPA + G + H +V+R+
Sbjct: 247 NFLTKEVKALNSSANMQDYIDSCPARKCLSNTGVRKDHYPKDVKRV 292
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 309 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 410
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 77 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 110
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 309 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 410
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 7 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 40
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 264 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 374
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 264 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 374
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 264 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 374
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,766,382
Number of Sequences: 27780
Number of extensions: 303745
Number of successful extensions: 795
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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