Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23m17
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 212 7e-55
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 212 7e-55
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 212 7e-55
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 212 7e-55
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 212 7e-55
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 210 2e-54
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 205 8e-53
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 84 9e-33
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 51 2e-06
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 51 2e-06
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 48 1e-05
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 31 1.8
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 212 bits (517), Expect = 7e-55
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 212 bits (517), Expect = 7e-55
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 212 bits (517), Expect = 7e-55
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 212 bits (517), Expect = 7e-55
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 212 bits (517), Expect = 7e-55
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 210 bits (513), Expect = 2e-54
Identities = 97/126 (76%), Positives = 112/126 (88%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT+QNRQAQI VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ I + MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 496 MARYLS 513
+AR LS
Sbjct: 153 LARELS 158
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 205 bits (500), Expect = 8e-53
Identities = 95/126 (75%), Positives = 111/126 (88%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLXPKKXGDDIAKATSDWKGLKITX 315
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGL PKK GDDIAKAT DWKGL+IT
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 316 QLTVQNRQAQIAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRS 495
+LT++NRQAQI VVPSA+A II+ LK+PPRDRKKQKNIKHNGNI+ + ++ IA+ MR+RS
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 496 MARYLS 513
+AR LS
Sbjct: 121 LARELS 126
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 84.2 bits (199), Expect(2) = 9e-33
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = +1
Query: 346 IAVVPSAAALIIRXLKEPPRDRKKQKNIKHNGNISLEXVIXIAKIMRNRSMARYLS 513
I VVPSA+ALII+ LKEPPRDRKKQKNIKH+GNI+ + ++ IA+ MR+RS+AR LS
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELS 93
Score = 75.8 bits (178), Expect(2) = 9e-33
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 136 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 246
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 51.2 bits (117), Expect = 2e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 298 PSSHLWPWQCHHPPF*EXDQEDRF*GPKMMWHRL 197
PSSH PWQCHH PF E D R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 51.2 bits (117), Expect = 2e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 298 PSSHLWPWQCHHPPF*EXDQEDRF*GPKMMWHRL 197
PSSH PWQCHH PF E D R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 48.4 bits (110), Expect = 1e-05
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -3
Query: 298 PSSHLWPWQCHHPPF*EXDQEDRF*GPKMMWHRL 197
PSSH PWQCHH PF D R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 271 IAKATSDWKGLKITXQLTVQNRQAQIAVVPSAAALIIR--XLKEPPRDRKKQ-KNIKHNG 441
I++ DWKG+ +T + Q QI ++ A+L IR L EP + RK K I
Sbjct: 429 ISRKFIDWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMA 488
Query: 442 NISLEXVIXIAK 477
+++ ++ I +
Sbjct: 489 SLTFGDILPITQ 500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,992,225
Number of Sequences: 237096
Number of extensions: 1302240
Number of successful extensions: 2142
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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