Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23m16
         (592 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75WV2 Cluster: Putative uncharacterized protein HMA7; ...    35   1.2  
UniRef50_Q92HS7 Cluster: Similarity to 5-formyltetrahydrofolate ...    34   2.9  
UniRef50_Q8I517 Cluster: Putative uncharacterized protein; n=3; ...    34   2.9  
UniRef50_Q4V7L2 Cluster: LOC733263 protein; n=5; Xenopus|Rep: LO...    33   3.8  
UniRef50_A0CJU5 Cluster: Chromosome undetermined scaffold_2, who...    33   5.0  
UniRef50_Q2J4W1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q8WYV8 Cluster: Putative uncharacterized protein pp1435...    33   6.6  
UniRef50_P61243 Cluster: Protein ycf2; n=1; Physcomitrella paten...    33   6.6  
UniRef50_UPI0000498359 Cluster: hypothetical protein 74.t00022; ...    32   8.7  
UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  
UniRef50_Q4Y1N3 Cluster: Putative uncharacterized protein; n=4; ...    32   8.7  
UniRef50_A7APJ6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q75WV2 Cluster: Putative uncharacterized protein HMA7;
           n=1; Nicotiana tabacum|Rep: Putative uncharacterized
           protein HMA7 - Nicotiana tabacum (Common tobacco)
          Length = 789

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 384 NRLNYLSKKVDYLHTDLLYYRNIKSKMGAACYEVWKTIVKKVGGSPNCWRDVGHLLGV-- 557
           ++L  LSK+  +   + + +   K    ++  E+ K IVKK GG P   R +G LL +  
Sbjct: 57  HKLGDLSKEEAWALLEKMAFVCTKESENSSLVEIGKEIVKKCGGVPLAIRSIGSLLRLKR 116

Query: 558 TQDDLNYIMN 587
           T+D+  Y  N
Sbjct: 117 TEDEWIYFKN 126


>UniRef50_Q92HS7 Cluster: Similarity to 5-formyltetrahydrofolate
           cyclo-ligase [EC:6.3.3.2]; n=8; Rickettsia|Rep:
           Similarity to 5-formyltetrahydrofolate cyclo-ligase
           [EC:6.3.3.2] - Rickettsia conorii
          Length = 196

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 168 ISSYKIKNVSMYFPV*YKVNMIEILF*TSDYLFSLVK-TNVKMEYLCEHLDETASVDTLQ 344
           +   K+K V +YFP+ Y++N++EI     +  F L K    +++Y   H ++  ++ T +
Sbjct: 61  LQELKVKTVGLYFPLKYEINLLEITNLHPEIRFFLPKIIKNEIKYCSYHYNDQLALGTFK 120

Query: 345 LEE 353
             E
Sbjct: 121 TYE 123


>UniRef50_Q8I517 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2309

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
 Frame = -2

Query: 546  NGQHLSNNLENPPLSSLWFSRLHSRQHPF*I*YFYSTINQYGGNQLFYLNNLIYLFQLLF 367
            N  +  N  E   +S L F+   S  H   + +F++ +N   GN LFY  +L YL +   
Sbjct: 1523 NNNNKKNKNEKNKMSELIFN---SEYHTERLIFFFNLLN---GNNLFYYLSLHYLVK--- 1573

Query: 366  VHVKILLIVVYLHLQFHQDVHINIPFLH*F*QD*KDNLKFKT---------RFQSCSLCI 214
             + KI+ I+ +L L++  D+ I    L+    D KD +KFKT          FQ  S  +
Sbjct: 1574 -NEKIMEILHFLPLKYLLDLLI----LY----DLKDYIKFKTIIRVFRIIYEFQDFSPIL 1624

Query: 213  KQENTY*HFLSCNSKCTINRNF--YEFF--ILSINLQILNVTKMH 91
            +++     F + N+ C  N +F  YEF+   L++N + L+  K +
Sbjct: 1625 RED----IFFNKNNYCLENADFMNYEFWCTFLTVNKKDLSPKKAY 1665


>UniRef50_Q4V7L2 Cluster: LOC733263 protein; n=5; Xenopus|Rep:
           LOC733263 protein - Xenopus laevis (African clawed frog)
          Length = 321

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 306 EHLDETASVDTLQLEEFLREQRAAEINRLNYLSKKVDYLHTDLLYYRNIKSKM 464
           EH+DE +SV T   +EFL +    +  RLN LS  +  +     +  ++KS M
Sbjct: 30  EHMDERSSVLTQDTQEFLTDLLNRQKTRLNELSSHLSSMAHSETFLSSLKSSM 82


>UniRef50_A0CJU5 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1529

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 276 KTNVKMEYLCEHLDETASVDTLQLEEFLRE-QRAAEINRLNYLSKKVDYLHTDLLYYRNI 452
           ++N K+EY  +       +DT  L++F ++ Q   +IN +N+  KK D++  +  +  N 
Sbjct: 201 ESNQKLEYFNQTFQFEIKLDTYDLKKFFKKIQNILQIN-VNFEPKKFDFIQNEKCFMSNT 259

Query: 453 K 455
           K
Sbjct: 260 K 260


>UniRef50_Q2J4W1 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. CcI3|Rep: Putative uncharacterized protein -
           Frankia sp. (strain CcI3)
          Length = 343

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 18/53 (33%), Positives = 32/53 (60%)
 Frame = +3

Query: 372 AAEINRLNYLSKKVDYLHTDLLYYRNIKSKMGAACYEVWKTIVKKVGGSPNCW 530
           AA+I+R+N +S ++    T +LY R  KS MG   +++W    +++  SP+ W
Sbjct: 100 AADISRINVISAEL----TGILYGRPAKSLMGMIFHDLW---ARQIVSSPDQW 145


>UniRef50_Q8WYV8 Cluster: Putative uncharacterized protein pp14356;
           n=1; Homo sapiens|Rep: Putative uncharacterized protein
           pp14356 - Homo sapiens (Human)
          Length = 135

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 435 LYYRNIKSKMGAACYEVWKTIVKKVGGSPNCWRDVGH 545
           L Y+N+ + +   C E  KT++K++    N WRD+ H
Sbjct: 13  LRYKNLTTYVQDLCEEKCKTLMKEIRDDLNKWRDIQH 49


>UniRef50_P61243 Cluster: Protein ycf2; n=1; Physcomitrella
           patens|Rep: Protein ycf2 - Physcomitrella patens (Moss)
          Length = 2259

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 263 KII*SSKQDFNHVHFVSNRKIHTNIFYL---VTRNVRLTETFMNFLFYQSIY 117
           KII   K D N+++  +N K++TN FYL   +  N    E +  FL +Q  Y
Sbjct: 620 KIIYKKKYDINNLNLSTNLKLYTNHFYLLKSLINNHFNIEKYNKFLLFQIKY 671


>UniRef50_UPI0000498359 Cluster: hypothetical protein 74.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 74.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 125

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 14/53 (26%), Positives = 32/53 (60%)
 Frame = +3

Query: 252 SDYLFSLVKTNVKMEYLCEHLDETASVDTLQLEEFLREQRAAEINRLNYLSKK 410
           +DY+ SL +TN     + + L ET++ ++  L  F+ +Q A +++++  L ++
Sbjct: 23  TDYIVSLNQTNTLFSKVLQSLMETSAANSQTLMSFIEKQSAYQLSQIECLKQQ 75


>UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 160

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = -3

Query: 335 IYTCSFIKMFT*IFHFYISFNKTKKII*SSKQDFNHVHFVSNRKIHTNIFYLVTRNVRLT 156
           +Y  + I++      +Y  F    KI    K +  H   +++RK++ + F ++     + 
Sbjct: 81  LYFLTTIQLIIFRVKYYYIFKNELKI----KHNQYHQFLINHRKLYASFFNVIL----IV 132

Query: 155 ETFMNF--LFYQSIYKFST 105
           +TF+ F  LFY  IYK+ST
Sbjct: 133 KTFLMFIFLFYLKIYKYST 151


>UniRef50_Q4Y1N3 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium chabaudi
          Length = 1547

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 23/78 (29%), Positives = 40/78 (51%)
 Frame = +3

Query: 216  YKVNMIEILF*TSDYLFSLVKTNVKMEYLCEHLDETASVDTLQLEEFLREQRAAEINRLN 395
            +K+N++E LF  ++YL  ++K N  MEYL ++    A +  L  E +L E+   +     
Sbjct: 1227 FKLNLLEKLFEQNNYLKEILKNNNVMEYLEKN---NAYLRNLIKENYLVEKHINDKKIFK 1283

Query: 396  YLSKKVDYLHTDLLYYRN 449
              +  +D  +  LL Y N
Sbjct: 1284 NYASNLD-AYNKLLSYEN 1300


>UniRef50_A7APJ6 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 244

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 230 HVHFVSNRKIHTNIFYLVTRNVRLTETFMNFLFYQSIYK 114
           H H V   KI  NI Y++ RN  +T   + F  +  IYK
Sbjct: 199 HHHLVDIHKIQRNINYVLIRNRTVTSIVLGFCLFLVIYK 237


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,888,353
Number of Sequences: 1657284
Number of extensions: 9705008
Number of successful extensions: 26329
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26303
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)