BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23m14
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28339-1|CAA82193.1| 326|Homo sapiens delta 4-3-oxosteroid 5 be... 32 1.9
BC130627-1|AAI30628.1| 326|Homo sapiens aldo-keto reductase fam... 32 1.9
BC130625-1|AAI30626.1| 326|Homo sapiens aldo-keto reductase fam... 32 1.9
AF283659-1|AAG39381.1| 326|Homo sapiens 5-beta steroid reductas... 32 1.9
>Z28339-1|CAA82193.1| 326|Homo sapiens delta 4-3-oxosteroid 5
beta-reductase protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 426 PENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSD 560
P++F++ +N D ++ E+ +D E L N+R ELL + D
Sbjct: 272 PKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRD 316
>BC130627-1|AAI30628.1| 326|Homo sapiens aldo-keto reductase family
1, member D1 (delta 4-3-ketosteroid-5-beta-reductase
protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 426 PENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSD 560
P++F++ +N D ++ E+ +D E L N+R ELL + D
Sbjct: 272 PKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRD 316
>BC130625-1|AAI30626.1| 326|Homo sapiens aldo-keto reductase family
1, member D1 (delta 4-3-ketosteroid-5-beta-reductase
protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 426 PENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSD 560
P++F++ +N D ++ E+ +D E L N+R ELL + D
Sbjct: 272 PKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRD 316
>AF283659-1|AAG39381.1| 326|Homo sapiens 5-beta steroid reductase
protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 426 PENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSD 560
P++F++ +N D ++ E+ +D E L N+R ELL + D
Sbjct: 272 PKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRD 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,419,283
Number of Sequences: 237096
Number of extensions: 1141850
Number of successful extensions: 2021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -