Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23m14
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026204-4|AAB71250.1|  319|Caenorhabditis elegans Hypothetical ...    32   0.38 
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    30   1.2  
U40419-3|AAK67216.3|  260|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U41540-10|AAK39228.1|  372|Caenorhabditis elegans Hypothetical p...    27   8.2  

>AF026204-4|AAB71250.1|  319|Caenorhabditis elegans Hypothetical
           protein C30E1.5 protein.
          Length = 319

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 381 IISLLRYCDYNWNPHPENFDINEFFKNKWPSDININ 488
           ++ L   C   WN H  N DIN FFK KW +  N N
Sbjct: 204 VLDLDLSCGRFWNSHLTNQDINTFFK-KWANGWNRN 238


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK1248.1 protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 105 VISSLDNLKIFFYSIDFLKMSHELLYLCNFDDNPDTIIDDKIKKLWC-NEWCIED 266
           ++ + D     + SI F  M HE+++   FDDN    +D  + KLW  N  C++D
Sbjct: 318 LLLNTDYFSDLYGSIGF-SMIHEIMHTLVFDDND---LDKPLSKLWTKNADCVKD 368


>U40419-3|AAK67216.3|  260|Caenorhabditis elegans Hypothetical
           protein C27F2.9 protein.
          Length = 260

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 411 NWNPHPENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSDQIFSTLSGIE 590
           NWNP        E++   +P       K+ RD  PL+  ++  E++YF D+ +     IE
Sbjct: 200 NWNPDKTTL---EWYTYDYP-------KLSRDELPLECEMKSGEVIYFPDKWWHATLNIE 249


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 447 HLYQNFRDADSSCS-HNILVEKL*PFPAYYLNNF 349
           H Y  + DAD S + ++    KL   P YYLNNF
Sbjct: 448 HWYDMYWDADESANEYHYPPYKLFHIPIYYLNNF 481


>U41540-10|AAK39228.1|  372|Caenorhabditis elegans Hypothetical
           protein F35H12.1 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 445 MNFLRINGQVILILMKKCKEIQNRCKQIS-GMQSYC 549
           +NF RIN Q+IL+ MK+  ++Q   +  S G + +C
Sbjct: 337 VNFNRINFQLILLDMKRLLQLQKGLESNSLGTKKFC 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,704,027
Number of Sequences: 27780
Number of extensions: 213118
Number of successful extensions: 568
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)