Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23m14
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.3  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   7.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.3  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   9.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 571 LNI*SEKYNNSACLI 527
           LN+ SEK  N  CL+
Sbjct: 94  LNVISEKIGNGGCLL 108


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/34 (17%), Positives = 19/34 (55%)
 Frame = +1

Query: 472 VILILMKKCKEIQNRCKQISGMQSYCIFQIKYLV 573
           ++LI+  KC+ + N  + +    +  + + +Y++
Sbjct: 22  ILLIIPSKCEAVSNDMQPLEARSADLVPEPRYII 55


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 219 DDKIKKLWCNE 251
           DDK   +WCNE
Sbjct: 213 DDKTFLVWCNE 223


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/34 (17%), Positives = 19/34 (55%)
 Frame = +1

Query: 472 VILILMKKCKEIQNRCKQISGMQSYCIFQIKYLV 573
           ++LI+  KC+ + N  + +    +  + + +Y++
Sbjct: 22  ILLIIPSKCEAVSNDRQSLEARSADLVPEPRYII 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,388
Number of Sequences: 438
Number of extensions: 2941
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)