BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23m08
(567 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p pro... 29 3.3
BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p pro... 29 3.3
AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-P... 29 3.3
AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-P... 29 3.3
BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p pro... 29 5.8
AY250783-1|AAP13278.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250782-1|AAP13277.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250781-1|AAP13276.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250780-1|AAP13275.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250779-1|AAP13274.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250778-1|AAP13273.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250777-1|AAP13272.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250776-1|AAP13271.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250775-1|AAP13270.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250774-1|AAP13269.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250773-1|AAP13268.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250772-1|AAP13267.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250771-1|AAP13265.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250770-1|AAP13266.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AY250769-1|AAP13264.1| 932|Drosophila melanogaster nucleoporin ... 29 5.8
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 29 5.8
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 28 7.7
>BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p
protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 137 DYVPHIFERSCYSI*CFHNGFKTLEIY 57
+Y I+ + C+ I C HN FKT +IY
Sbjct: 16 EYGVDIWRKVCHIIDCKHNSFKTHQIY 42
>BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p
protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 137 DYVPHIFERSCYSI*CFHNGFKTLEIY 57
+Y I+ + C+ I C HN FKT +IY
Sbjct: 16 EYGVDIWRKVCHIIDCKHNSFKTHQIY 42
>AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-PC,
isoform C protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 137 DYVPHIFERSCYSI*CFHNGFKTLEIY 57
+Y I+ + C+ I C HN FKT +IY
Sbjct: 16 EYGVDIWRKVCHIIDCKHNSFKTHQIY 42
>AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-PB,
isoform B protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 137 DYVPHIFERSCYSI*CFHNGFKTLEIY 57
+Y I+ + C+ I C HN FKT +IY
Sbjct: 16 EYGVDIWRKVCHIIDCKHNSFKTHQIY 42
>BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p
protein.
Length = 1191
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 669 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 728
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 729 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 777
>AY250783-1|AAP13278.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250782-1|AAP13277.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250781-1|AAP13276.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250780-1|AAP13275.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250779-1|AAP13274.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250778-1|AAP13273.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250777-1|AAP13272.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250776-1|AAP13271.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250775-1|AAP13270.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250774-1|AAP13269.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250773-1|AAP13268.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250772-1|AAP13267.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250771-1|AAP13265.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250770-1|AAP13266.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AY250769-1|AAP13264.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 410 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 469
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 470 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 518
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 201 ELVALGKENHDQYV--RSLAMDAYLSLLSAKTMPCSLVEKKNILQVAFDKLKPYAIREEC 374
ELV L K +H + R+L + + L K + V + L+ D L + + E C
Sbjct: 1438 ELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDLLSKKVSTHSYLEHMLDLLSCHRVNEAC 1497
Query: 375 -LFILLKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDL 530
L NL + L Q + + MEE ++S++DK++D E L
Sbjct: 1498 ELAFSYDDANLA----LVLSQLSSGAVFRLLMEEQLFAWQQSKSDKYIDLERL 1546
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 28.3 bits (60), Expect = 7.7
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +3
Query: 114 FENVRNVIKNKSSMERLQSL-KKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLL---- 278
FEN N KN S++ LQS D+ + EL+ + H R M L +
Sbjct: 445 FENTLNTAKNAFSLQSLQSQNNSDLGRITNELLTKNAQIHKLNGRFEDMACKLKIAELHR 504
Query: 279 -SAKTMPCSLVEKKNILQVAFDKLKPYAIREECLFILLKVQNLLCYYLIQLDQFTQASNI 455
AK E+ ++ Q+ + P +R+ + L ++Q+ L L ++D+ N
Sbjct: 505 DKAKQEAQEWKERYDLAQIQLN--LPAELRDLSIQKLKQLQSKLRTDLEEVDKVLYLENA 562
Query: 456 LKSME 470
K ME
Sbjct: 563 KKCME 567
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,557,007
Number of Sequences: 53049
Number of extensions: 446708
Number of successful extensions: 1307
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -