Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23m08
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 30 1.0
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 30 1.3
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 29 1.8
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 29 1.8
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 29 1.8
U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect... 29 3.1
U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein. 29 3.1
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 29 3.1
Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81038-11|CAB02761.1| 230|Caenorhabditis elegans Hypothetical p... 27 7.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 7.1
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 414 YLIQLDQFTQASNILKSMEELYDKIEKSQTD 506
Y I++D +SNI +S+EEL KI K+ TD
Sbjct: 489 YCIKIDH-QNSSNIAESLEELTTKISKNNTD 518
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 387 LKVQNLLCYYLIQLDQFTQASNILKSMEELYDKIEKSQTDK 509
+K + L YL ++F S LK EEL DKI K DK
Sbjct: 346 VKARRALEKYLHYFERFENHSKSLKMEEELRDKIRKKIDDK 386
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 423 QLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKR 563
+LDQF S +++ EL +++EK++ D+ L E+ E+ N +R
Sbjct: 1056 RLDQFQMQSESGQTIVELTEQLEKAKADRVLWDEERQRMEAALNTER 1102
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 423 QLDQFTQASNILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKR 563
+LDQF S +++ EL +++EK++ D+ L E+ E+ N +R
Sbjct: 1056 RLDQFQMQSESGQTIVELTEQLEKAKADRVLWDEERQRMEAALNTER 1102
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = +3
Query: 54 KINFKCFKSVMETLDRITTTFENVRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHD 233
++ F C++++++++D+ N+ K++ E ++SLKK + G E N
Sbjct: 124 EVLFMCYQTIIDSIDQSHLKIINLNEACALKNNGETIESLKKKILGKGEEAAEEHFVN-T 182
Query: 234 QYVRSLAMDAYLSLLSAKTMPCSLV 308
+ + D+ + K PCS V
Sbjct: 183 LFDCEVCYDSQMGQHCIKFQPCSHV 207
>U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect
sterile protein3, isoform a protein.
Length = 754
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 216 PKLPVPCPGCACLS*DFEGVPLNSYS 139
P+ P+P G LS D EG P++++S
Sbjct: 626 PRKPIPTVGNTTLSLDLEGCPISTFS 651
>U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein.
Length = 754
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 216 PKLPVPCPGCACLS*DFEGVPLNSYS 139
P+ P+P G LS D EG P++++S
Sbjct: 626 PRKPIPTVGNTTLSLDLEGCPISTFS 651
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +3
Query: 135 IKNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRS--LAMDAYLSLLSAKTMPCSLV 308
+ KSS+ + ++ +KD GM+ V L Q++++ +Y+S+L T P L
Sbjct: 128 LAKKSSLLK-KAFEKDPIVGGMDNVGLALFLACQWIQNEKSKWKSYISILPT-TFPTPLF 185
Query: 309 -EKKNILQVAFDKLKPYAIREECLFILLKVQNLLCYYLIQL 428
++ +LQ LKP I EE + + CY+L+ +
Sbjct: 186 YSEEQLLQ-----LKPSPIFEEAILFYRTISRQFCYFLLAI 221
>Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical
protein C54E10.1 protein.
Length = 872
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 99 RITTTFENVRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLL 278
++ T NVRNV+KNKS R + D+ L + ++D+ R + +D + L
Sbjct: 166 QLQTKSRNVRNVVKNKSG-PRPTTHPSDLTELARNTPSCLSHSNDEEFRFMHIDMDILSL 224
Query: 279 SAKTMP 296
+P
Sbjct: 225 YVSQLP 230
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 57 INFKCFKSVMETLDRITTTFEN-VRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHD 233
IN +++E + T EN V I++K+ + + K + T+ E+ A E+HD
Sbjct: 1321 INDNVLAAILEPDEEPKTEEENDVVTEIEDKAR-DFGEFQKPTLLTICQEVEAYFSEHHD 1379
Query: 234 QYVRSLAMDAYLSLLSAKTMPCSLVE-KKNILQ 329
+YV S+ D L + +T S+ E K I++
Sbjct: 1380 EYVGSVVDDMELRKIFKETYGGSIPEDHKQIIE 1412
>Z81038-11|CAB02761.1| 230|Caenorhabditis elegans Hypothetical
protein C25A1.2 protein.
Length = 230
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 282 RKEEINRRPLQETSRTGRDSPYPKLPV 202
R EEI R+ L ++ + +DSP+P +P+
Sbjct: 36 RMEEILRQFLSSSNHSLKDSPFPMIPL 62
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 57 INFKCFKSVMETLDRITTTFEN-VRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHD 233
IN +++E + T EN V I++K+ + + K + T+ E+ A E+HD
Sbjct: 1321 INDNVLAAILEPDEEPKTEEENDVVTEIEDKAR-DFGEFQKPTLLTICQEVEAYFSEHHD 1379
Query: 234 QYVRSLAMDAYLSLLSAKTMPCSLVE-KKNILQ 329
+YV S+ D L + +T S+ E K I++
Sbjct: 1380 EYVGSVVDDMELRKIFKETYGGSIPEDHKQIIE 1412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,991,873
Number of Sequences: 27780
Number of extensions: 241510
Number of successful extensions: 668
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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