Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23m07
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p pro...    72   4e-13
AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA...    72   4e-13
U35682-1|AAA79181.1|  163|Drosophila melanogaster signal recogni...    72   6e-13
U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.        29   4.1  
BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p pro...    29   4.1  
AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.      29   4.1  
AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA...    29   4.1  

>AY089689-1|AAL90427.1|  160|Drosophila melanogaster RH65975p
           protein.
          Length = 160

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +3

Query: 240 ILESRKEAQ*CGKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR 419
           ++E++K  +    EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQN+
Sbjct: 69  LMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNK 128

Query: 420 ---PVEQQPQPTNQA 455
                 QQ QP + A
Sbjct: 129 SGDSYHQQSQPQSNA 143


>AE014296-1238|AAF50575.1|  160|Drosophila melanogaster CG4457-PA
           protein.
          Length = 160

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +3

Query: 240 ILESRKEAQ*CGKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR 419
           ++E++K  +    EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQN+
Sbjct: 69  LMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNK 128

Query: 420 ---PVEQQPQPTNQA 455
                 QQ QP + A
Sbjct: 129 SGDSYHQQSQPQSNA 143


>U35682-1|AAA79181.1|  163|Drosophila melanogaster signal
           recognition particle 19kDa protein protein.
          Length = 163

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +3

Query: 240 ILESRKEAQ*CGKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR 419
           ++E++K  +    EM +RGR+RVQ++N DG   N +FPTRES+M +I   IP+LKTRQN+
Sbjct: 72  LMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNIDFPTRESIMLHIASKIPQLKTRQNK 131

Query: 420 ---PVEQQPQPTNQA 455
                 QQ QP + A
Sbjct: 132 SGDSYHQQSQPQSNA 146


>U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 419
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p
           protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 419
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 419
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


>AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA
           protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 419
           ND+G  V P  +FPT     K+I +  PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,353,238
Number of Sequences: 53049
Number of extensions: 404152
Number of successful extensions: 972
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)