Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23m05
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.6  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   7.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   7.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.8  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 299 SAPPATRGCVRPTPSWNATLTTP 367
           + P ++ G  + T  W++ LTTP
Sbjct: 392 TGPLSSTGLAQVTGIWHSNLTTP 414


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -3

Query: 295 IATIVLGDS-TPPPP 254
           +  IVLGDS TPP P
Sbjct: 327 LVNIVLGDSDTPPKP 341


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 179 TGRSGSSTTFVRIRQKPITYMVNHPWRR 262
           TG+S  +   +R  + P+   V HP+R+
Sbjct: 2   TGQSVEAVMSLRALKYPMVVHVYHPYRQ 29


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 179 TGRSGSSTTFVRIRQKPITYMVNHPWRR 262
           TG+S  +   +R  + P+   V HP+R+
Sbjct: 2   TGQSVEAVMSLRALKYPMVVHVYHPYRQ 29


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 245 NHPWRRWSRISENDCRDGSAPPATRGC 325
           +H W+   RI +N+  +    P T  C
Sbjct: 11  SHGWQIRDRIGDNELEERIIYPGTLWC 37


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 245 NHPWRRWSRISENDCRDGSAPPATRGC 325
           +H W+   RI +N+  +    P T  C
Sbjct: 16  SHGWQIRDRIGDNELEERIIYPGTLWC 42


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 303 ALPSRQSFSEIRLHLLQGWFTM*VIGFC 220
           +L SR    ++R      WF +   G+C
Sbjct: 291 SLDSRTDLPKVRYATALDWFLLMSFGYC 318


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 265 PPPPGMVYH 239
           PPPP + YH
Sbjct: 321 PPPPNLDYH 329


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 245 NHPWRRWSRISENDCRDGSAPPATRGC 325
           +H W+   RI +N+  +    P T  C
Sbjct: 16  SHGWQIRDRIGDNELEERIIYPGTLWC 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,343
Number of Sequences: 438
Number of extensions: 4014
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)