Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23l23
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061473-1|AAL29021.1|  495|Drosophila melanogaster LD44032p pro...    38   0.013
AE014297-686|AAF54178.1|  495|Drosophila melanogaster CG10435-PA...    38   0.013
AE014296-2054|AAF49994.2|  579|Drosophila melanogaster CG14128-P...    30   2.6  
AY094658-1|AAM11011.1| 1152|Drosophila melanogaster AT22189p pro...    29   5.9  
AE014134-2864|AAF53627.2| 1152|Drosophila melanogaster CG15143-P...    29   5.9  

>AY061473-1|AAL29021.1|  495|Drosophila melanogaster LD44032p
           protein.
          Length = 495

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = +2

Query: 239 MDGVPVKISEKYKKPPSI-ELPYTLIE--CPIRAQNVVD--NVKYCSSFESNVLIKVKEL 403
           M+ VPVKI E+YK PP++  LP   +      R     D  + +Y    E  VL + +  
Sbjct: 1   MEDVPVKIVERYKPPPAVYHLPQATLNRLSQFREGFYTDHPDYQYDCQLERAVLSQAQRW 60

Query: 404 RRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSD 583
           R ++  ++ ER  R            +    A +KE L       V YPS D+++    D
Sbjct: 61  RHLRRQQREERASRQERRKEERQRALE----ARQKEML-----GAVDYPSADDLSS-DED 110

Query: 584 EK 589
           EK
Sbjct: 111 EK 112


>AE014297-686|AAF54178.1|  495|Drosophila melanogaster CG10435-PA
           protein.
          Length = 495

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = +2

Query: 239 MDGVPVKISEKYKKPPSI-ELPYTLIE--CPIRAQNVVD--NVKYCSSFESNVLIKVKEL 403
           M+ VPVKI E+YK PP++  LP   +      R     D  + +Y    E  VL + +  
Sbjct: 1   MEDVPVKIVERYKPPPAVYHLPQATLNRLSQFREGFYTDHPDYQYDCQLERAVLSQAQRW 60

Query: 404 RRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSD 583
           R ++  ++ ER  R            +    A +KE L       V YPS D+++    D
Sbjct: 61  RHLRRQQREERASRQERRKEERQRALE----ARQKEML-----GAVDYPSADDLSS-DED 110

Query: 584 EK 589
           EK
Sbjct: 111 EK 112


>AE014296-2054|AAF49994.2|  579|Drosophila melanogaster CG14128-PA
           protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
 Frame = +2

Query: 215 DMSHFGDFMDGVPVKISEKYKKPPSIELPYTLIECPIR-AQNVVDNVKYCSSFESNVLIK 391
           D+S FG  M      ISE  K+  ++E PY + E  +  A   V+ V   + FE+   +K
Sbjct: 90  DLSFFGPVM----CSISEFNKEEQTME-PYFIQELDMACAGQEVEQVAEENVFETGPQLK 144

Query: 392 VKELRRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQ---LNVSEVSYPSTDE 562
           + E + I ++   E                + + LAE  E + +   +++ EV+    +E
Sbjct: 145 LPENQPINDSITTETNETKLPSTEAL----NVLNLAEFSEPVMEKSNISIEEVNLTGAEE 200

Query: 563 INPLTSDEKN 592
           IN   SDE N
Sbjct: 201 INEPISDEPN 210


>AY094658-1|AAM11011.1| 1152|Drosophila melanogaster AT22189p
           protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +2

Query: 224 HFGDFMDGVPVKISEKYKKPPSIELPYTLIE-CPIRAQNVV---DNVKYCSSFES 376
           ++ D  D V   I +K + PP++  P  LIE CP  + N +   DN++   +F +
Sbjct: 736 NYNDLFDDVFAGIFDKSENPPAVR-PSQLIELCPTVSHNYIHHMDNIREMENFHT 789


>AE014134-2864|AAF53627.2| 1152|Drosophila melanogaster CG15143-PA
           protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +2

Query: 224 HFGDFMDGVPVKISEKYKKPPSIELPYTLIE-CPIRAQNVV---DNVKYCSSFES 376
           ++ D  D V   I +K + PP++  P  LIE CP  + N +   DN++   +F +
Sbjct: 736 NYNDLFDDVFAGIFDKSENPPAVR-PSQLIELCPTVSHNYIHHMDNIREMENFHT 789


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,020,926
Number of Sequences: 53049
Number of extensions: 486334
Number of successful extensions: 1133
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)