Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23l23
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 0.12
Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 3.1
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 28 5.4
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 7.1
U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.4
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 29.5 bits (63), Expect(2) = 0.12
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 422 KKNERKHRXXXXXXXXXXXXDAIAL-AEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEI 598
+K +KH+ D L E+KE+ K+ + ++ P + D+++++
Sbjct: 794 RKKHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDDEDKV 853
Query: 599 NCDSNIGDTKE 631
D N D KE
Sbjct: 854 ELDKNFADKKE 864
Score = 23.0 bits (47), Expect(2) = 0.12
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +2
Query: 395 KELRRIKETKKNERKHR 445
K++++ K++KKN++ HR
Sbjct: 765 KKMKKHKKSKKNKKHHR 781
>Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical
protein F59A1.3 protein.
Length = 343
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 664 YINICYANFSGFFCITYVTITVNFIFLIRSQWIYL 560
Y+ +C N S F YVTI + + ++W+ L
Sbjct: 113 YLAVCKPNMSKLFSFPYVTILILIFVFVSAEWLVL 147
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 267 KNTKNLQVLSYRTP**NAQSELKMLWTTLNI 359
KN+K SY T N S+LK++WTTL I
Sbjct: 265 KNSKTPASRSYSTRSTNVYSKLKLVWTTLLI 295
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 320 PIRAQNVVDNVKYCSSFESNVLI 388
P +D +KYC SF++NVL+
Sbjct: 1177 PAEPHTALDIIKYCESFKTNVLV 1199
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical protein
T28F3.5 protein.
Length = 1679
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 108 SHQKFMMYKSQFQDFFHIF*IKNGFVVFLLNF 13
S QKF + + +QDFF IF +K F +FL F
Sbjct: 1634 SKQKFDQFIATWQDFFFIFLLKY-FSIFLFYF 1664
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/83 (24%), Positives = 31/83 (37%)
Frame = +2
Query: 395 KELRRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPL 574
KE + +E KK E K EEK++L E D+ +
Sbjct: 70 KEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDER 129
Query: 575 TSDEKNEINCDSNIGDTKETAEV 643
D+K E N + + + K+ EV
Sbjct: 130 KEDDKKEENKEKSKDEEKKKDEV 152
>Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical
protein T26H2.3 protein.
Length = 385
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 25 KHYKTIFYLENMKEVLKL*FIHHKFLM**VMTSDGGYL----TLKVIVLKETNIALSLFD 192
K+ + +++N+ ++ K F+ H++ + ++ + +L LKV+ +K+ N+ L +
Sbjct: 221 KNSLPLAFIQNL-DIFKSHFLAHQYQLNDILIMNSEHLHLSSDLKVLSMKDLNLFLKCWM 279
Query: 193 YRSDIQL*YVTFWRFHG 243
S+ +L Y+T + HG
Sbjct: 280 KGSNRKLEYLTVYGRHG 296
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.9 bits (59), Expect = 7.1
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Frame = +2
Query: 269 KYKKPPSIELPYTLIECPIR-AQNVVDNVKYCSSFESNVLIKVKELRRIKETKKNERKHR 445
K KK + P ++ + P++ A + + + + + V KV+E KE KK E K
Sbjct: 24 KGKKKNTSAAPVSIRKPPMKPACSTIQPTDFPPASAAPVAPKVEEK---KEEKKEEEKKA 80
Query: 446 XXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNIGDT 625
EEK+++ E D+ + DEK E + + + +
Sbjct: 81 DDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEE 140
Query: 626 KETAEV 643
K+ EV
Sbjct: 141 KKKDEV 146
>U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical
protein F21F8.11 protein.
Length = 530
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 645 LTSAVSFVSPMLLSQLISFFSSEVSGFISSVL 550
+ A F + +LLS + +FF +SGF +S+L
Sbjct: 403 MNCATPFYALVLLSSVSAFFGLSISGFYTSLL 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,094,975
Number of Sequences: 27780
Number of extensions: 275977
Number of successful extensions: 788
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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