Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23l19
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   1.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   2.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   2.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   2.9  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   3.9  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   3.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   5.1  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   6.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   6.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.9  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 141 FNHFEFVYVYKKNNKNMCSYFRKYI 67
           +N+    Y Y  NN N   Y++ YI
Sbjct: 322 YNYNNNNYKYNYNNYNKKLYYKNYI 346


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 120 YVYKKNNKNMCSYFRKYI 67
           Y Y  NN N   Y++ YI
Sbjct: 104 YNYNNNNYNKKLYYKNYI 121


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 316 FSTYIRQIKYNIKLFIFHYTL 254
           F   IRQ + N K F FH T+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITI 506


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 316 FSTYIRQIKYNIKLFIFHYTL 254
           F   IRQ + N K F FH T+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITI 506


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 264 TTPCSCRLC 238
           T PC C LC
Sbjct: 40  TLPCKCHLC 48


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 322 FTFSTYIRQIKYNIKLFIFHYTL*LSSLCFSVP 224
           + +S Y     YN KL+  +Y + +  +   VP
Sbjct: 89  YKYSNYNNYNNYNKKLYYKNYIINIEQIPVPVP 121


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 159 SLGISVFNHFEFVYVYKKNN 100
           +LG   F+H+E   V+ KN+
Sbjct: 272 TLGKKEFSHYEHQNVFVKNS 291


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 125 LFTSTKKTTKICVLILENIYHFK 57
           LFT    T  ICV ++    HF+
Sbjct: 308 LFTMILDTFSICVTVVVLNVHFR 330


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 138 NHFEFVYVYKKNNKNMCS 85
           NH +F Y    NN+N  S
Sbjct: 479 NHADFSYTIVINNRNNTS 496


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 132 FEFVYVYKKNNKNMCSYFRKYI 67
           F F+++   NN++  S F++ I
Sbjct: 312 FNFMFIADLNNQSTASDFKQLI 333


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = -3

Query: 321 LHFQHIFVKXXXXXNYLYFTTPCSCRL 241
           +HF  +F        Y +FT   S  L
Sbjct: 461 IHFAQLFADRGMKVYYYFFTQRTSTNL 487


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,337
Number of Sequences: 438
Number of extensions: 1597
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)