Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23l04
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83316-9|CAN99655.1|  250|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    29   2.6  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    29   2.6  
Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical pr...    28   4.5  
L23648-3|AAN63386.1|  438|Caenorhabditis elegans Cyclin t protei...    28   4.5  
L23648-1|AAA28034.1|  468|Caenorhabditis elegans Cyclin t protei...    28   4.5  
AF068709-6|AAC19249.1|  319|Caenorhabditis elegans Serpentine re...    28   4.5  
U00057-1|AAA50726.2|  347|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC024882-1|AAF60940.1|  369|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF045644-4|AAC02599.1|  211|Caenorhabditis elegans Onchocerca re...    27   7.9  

>Z83316-9|CAN99655.1|  250|Caenorhabditis elegans Hypothetical
           protein B0379.4c protein.
          Length = 250

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 338 MFQSLFSYAYNYNHFVLVSPQ*VPCSMESLRIRLLYC 228
           MFQ  F Y  NY   +   P   P ++E + + LL+C
Sbjct: 13  MFQDEFDYRLNYRELIEWKPGRTPSALEIIELGLLHC 49


>Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical
           protein ZK822.1 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 452 RQRLSIFLPHSLDGLNSANSQQMMLFPSTFSLAHHCRQMFQSLFSYAYNYNHFVLVSPQ 276
           RQ LS +LP  L G    NS++ +   +      +  + F  LFSY+ +++  +   P+
Sbjct: 575 RQDLSFYLPLKLHGSRVENSRRTIKKNAIVGNDRNIEEEFLKLFSYSKDFSMELAAPPE 633


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -3

Query: 495 SPNHSFMSTPQLSPSTASFHISSSFT*WSEFCQFSADDALSLNIFSGTSLQT 340
           SPNH+  S   L+ S AS   SS+F   SE+ + +  D+      S  SL T
Sbjct: 661 SPNHTSTSGISLNSSNASPSASSNFLASSEYLEHARTDSFGSARSSPKSLHT 712


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -3

Query: 495 SPNHSFMSTPQLSPSTASFHISSSFT*WSEFCQFSADDALSLNIFSGTSLQT 340
           SPNH+  S   L+ S AS   SS+F   SE+ + +  D+      S  SL T
Sbjct: 661 SPNHTSTSGISLNSSNASPSASSNFLASSEYLEHARTDSFGSARSSPKSLHT 712


>Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -1

Query: 512 GTRPDCHRTTRLC-PLRSCHHRQRLSIFLPHSLDGLNSANSQQMMLFPSTFSLAHHCRQM 336
           GT     + + L  P   CH +Q  +I  PH+L  L S  +  +  +    +  HHC  +
Sbjct: 46  GTTTSARKHSSLSQPALRCHSKQHHNILSPHALAVL-SLGADVLPEYKLQPTRIHHCTIV 104

Query: 335 FQSLFSYAYNYNHFVLV 285
             S F   +++   +LV
Sbjct: 105 HYSPFKAVWDWIILLLV 121


>Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -1

Query: 512 GTRPDCHRTTRLC-PLRSCHHRQRLSIFLPHSLDGLNSANSQQMMLFPSTFSLAHHCRQM 336
           GT     + + L  P   CH +Q  +I  PH+L  L S  +  +  +    +  HHC  +
Sbjct: 46  GTTTSARKHSSLSQPALRCHSKQHHNILSPHALAVL-SLGADVLPEYKLQPTRIHHCTIV 104

Query: 335 FQSLFSYAYNYNHFVLV 285
             S F   +++   +LV
Sbjct: 105 HYSPFKAVWDWIILLLV 121


>L23648-3|AAN63386.1|  438|Caenorhabditis elegans Cyclin t protein
           1.1, isoform b protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 452 RQRLSIFLPHSLDGLNSANSQQMMLFPSTFSLAHHCRQMFQSLFSY-AYNY 303
           RQ  + F+   +DGLN+    +M +  +   +AH     F  L S+  Y+Y
Sbjct: 46  RQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVAHTHMHRFYYLHSFKKYDY 96


>L23648-1|AAA28034.1|  468|Caenorhabditis elegans Cyclin t protein
           1.1, isoform a protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 452 RQRLSIFLPHSLDGLNSANSQQMMLFPSTFSLAHHCRQMFQSLFSY-AYNY 303
           RQ  + F+   +DGLN+    +M +  +   +AH     F  L S+  Y+Y
Sbjct: 46  RQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVAHTHMHRFYYLHSFKKYDY 96


>AF068709-6|AAC19249.1|  319|Caenorhabditis elegans Serpentine
           receptor, class t protein27 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = -2

Query: 106 FGLFICHCLIQNNLVVHQIYALNQQN 29
           FGL+ C C+I  +LV+++I  L++++
Sbjct: 116 FGLWCCSCIIAMSLVINRILDLSKES 141


>U00057-1|AAA50726.2|  347|Caenorhabditis elegans Hypothetical
           protein T24G10.2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 24/86 (27%), Positives = 39/86 (45%)
 Frame = +2

Query: 218 NTTYNIKAESSDSPLNRGLIEETQEQNDYNCKHMKIMTETFVCNDVPEKMLRERASSAEN 397
           N  +NI  +S  S L + +IEE +++ND N         T   +D  E    E+    E 
Sbjct: 43  NNRFNINFDSYKSQLKKMVIEEIKKRNDENGSDSSDDGGTDSDSDHEEG--EEKKEKTEK 100

Query: 398 WQNSDHQVNEEEIWKDAVDGDSCGVD 475
            +  +  V  ++  K+  D DS GV+
Sbjct: 101 VKKEELPVKAKKEVKEDSDSDS-GVE 125


>AC024882-1|AAF60940.1|  369|Caenorhabditis elegans Hypothetical
           protein Y9C9A.17 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -1

Query: 371 STFSLAHHCRQMFQSLFSYAYNYNHFVLVSPQ*VPCSMESLRIRLLYCTLC-YVFFSIS 198
           S   LA++ R +    F +  +   F++ S         SL +R   CTLC + FF +S
Sbjct: 174 SDSELANYWRPILNDSFDFNIDKASFIIFSYWITVNGASSLNVRDFVCTLCLHAFFLLS 232


>AF045644-4|AAC02599.1|  211|Caenorhabditis elegans Onchocerca
           related antigen familyprotein 1 protein.
          Length = 211

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 407 SDHQVNEEEIWKDAVDGDSC 466
           SD Q    EIWKD  +GD C
Sbjct: 47  SDVQTKITEIWKDYKEGDKC 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,877
Number of Sequences: 27780
Number of extensions: 321347
Number of successful extensions: 863
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)