Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23l03
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U28737-9|AAA68276.1|  345|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical
           protein W05B5.1 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 326 PDGKPGKCINIYSCE-HLTQMLRPP-TSKENMLYVQNSRCK 442
           P  +PG   N  + + H TQ   PP T+ E+ LY+QN   K
Sbjct: 115 PPSRPGSAQNTPTKQQHFTQAATPPPTNHESPLYLQNGLSK 155


>Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical
           protein T23G5.1 protein.
          Length = 788

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +1

Query: 358 ILLRTPHSNVEASDLEGKHVIRT----KLQV*KCRSIQCMLWPSAFSHTPSSSGQLQGDC 525
           +L+R P ++ EA DL  K +  T     L+   C   +     S +  +P S GQLQ D 
Sbjct: 519 MLMRYPFTSAEARDLN-KRIFETIYYAALEA-SCELAELNGPYSTYEGSPVSKGQLQFDM 576

Query: 526 FGIT 537
           +G+T
Sbjct: 577 WGVT 580


>U28737-9|AAA68276.1|  345|Caenorhabditis elegans Hypothetical
           protein F14B8.6 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 119 YLCGANGQSACTASG 163
           Y CG+NGQ  C ASG
Sbjct: 178 YTCGSNGQKTCCASG 192


>Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.6 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 251 EALKKSQCGFQGGKPLVCCPSECHTPDGKPGK 346
           EA++    G QGG    CC      P G PGK
Sbjct: 87  EAVETGNTGSQGGSCSGCCLPGAAGPAGTPGK 118


>Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.5 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 251 EALKKSQCGFQGGKPLVCCPSECHTPDGKPGK 346
           EA++    G QGG    CC      P G PGK
Sbjct: 87  EAVETGNTGSQGGSCSGCCLPGAAGPAGTPGK 118


>Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.1 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 251 EALKKSQCGFQGGKPLVCCPSECHTPDGKPGK 346
           EA++    G QGG    CC      P G PGK
Sbjct: 87  EAVETGNTGSQGGSCSGCCLPGAAGPAGTPGK 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,346,454
Number of Sequences: 27780
Number of extensions: 372616
Number of successful extensions: 923
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)