Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23k15
(609 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0106 + 19802171-19802323,19802486-19802653 31 0.71
02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948... 30 1.6
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 29 2.2
06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514 29 2.2
02_01_0740 - 5511434-5511547,5511952-5512023,5512106-5512300,551... 29 2.9
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 29 3.8
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 3.8
04_04_1548 - 34313212-34313304,34313518-34313632,34314097-343142... 28 5.0
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 28 5.0
01_06_0746 - 31636024-31641396 28 5.0
06_03_1248 + 28685911-28687719 28 6.7
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 6.7
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 28 6.7
05_03_0458 + 14280953-14281866,14281964-14282912 27 8.8
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 27 8.8
>02_04_0106 + 19802171-19802323,19802486-19802653
Length = 106
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 462 SQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIENAYYECLKQ 602
SQ + + L H QNL Q +LQC N + S SS+ + E +Q
Sbjct: 55 SQEKMIRLLNEHIQNLQQQLLQCRVNNRTANSSGSSLTSYIGEIQRQ 101
>02_05_0036 -
25292150-25293124,25294021-25294206,25294704-25294874,
25295135-25295353,25295461-25295712,25295802-25295903,
25296487-25296684,25296762-25297046,25297640-25297709,
25297797-25297970,25298825-25298952,25299059-25299163,
25299686-25300030,25300361-25300563,25300964-25301045,
25301667-25301744
Length = 1190
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 519 ILQCLKNIKPL-PDSSSSIENAYYEC 593
IL LKN+K L P S+ +ENAYY C
Sbjct: 631 ILMRLKNVKNLDPRHSTLVENAYYLC 656
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 383 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPE 535
PT + ++ + P+P S+ Y +STI+ T VN Q L PS H VP+
Sbjct: 495 PTHNGTASTSHSAGPQPSSAPYASSTIT--THRVNCQSL--PSQQHGSVPQ 541
>06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514
Length = 323
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 206 TEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLP 385
T++ E +++ + +S I TA + +R +++E D + +D + +V
Sbjct: 168 TDRSRNSEDTSNGFSATNGASGAKINGTAKAKQDGSIRRRQKVEADQVSNTTDTQDDVF- 226
Query: 386 TSDIASNILNEQVPKPVSSNYVNSTISNP 472
T I + +P+P+SS N SNP
Sbjct: 227 TDPI--KMTKSLLPRPISSIRQNMDTSNP 253
>02_01_0740 -
5511434-5511547,5511952-5512023,5512106-5512300,
5512408-5512611,5512690-5512848,5513144-5513249,
5513387-5513554,5513644-5513834,5514410-5514634,
5514818-5514935,5515023-5515195,5515280-5515327,
5515484-5515589,5515697-5515802,5516211-5516332,
5516661-5516741,5516844-5516934,5517036-5517132,
5517287-5517919
Length = 1002
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 209 EKGFEGEQSTSSWDVPGPSSLGAILDT 289
E G EGE+S +SW VP G DT
Sbjct: 104 EDGEEGEESVASWGVPDDCYYGNFSDT 130
>04_04_1157 -
31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 224 GEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAES 361
G+Q+ SSW++ G G D S+ D+ N + CD F S
Sbjct: 50 GQQAQSSWNLSGDPCTGRATD---GSAIDDTSFNPAITCDCTFQNS 92
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 401 MQYQMWVAPPLHHHSQQTKHHTPFLHFSVDCQH 303
+Q M VAP HH QQ HH P L + QH
Sbjct: 692 LQTGMMVAPT-HHREQQKHHHHPHLQPHGEEQH 723
>04_04_1548 -
34313212-34313304,34313518-34313632,34314097-34314287,
34314391-34315379,34315989-34316136,34316349-34316424,
34316946-34317110,34317196-34317286,34318069-34318153,
34318256-34318411,34318479-34318586,34318713-34318811,
34318927-34319036,34319139-34319208
Length = 831
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 465 QIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIENAYYECL 596
Q+ L YN NL ++ N+ +P S+ ++NA Y CL
Sbjct: 636 QVDSSSLLYNMVPNLTSNVSD--GNLSTIPSGSTYLQNAMYGCL 677
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 399 HQIYLTNRCPNQYHLTM*TQ-QSQIQHLMLTYNH--SQNLHQHILQCLKNIKPLPDSS-- 563
H +Y N P+ + + Q S L + +H SQ H H L+ + L DSS
Sbjct: 639 HPVYSQNSIPSSGYSSWRPQIGSGSFSLEASSSHGPSQTFHSHFAPRLQTLDNLSDSSAA 698
Query: 564 SSIENAYYE 590
S+++NAY++
Sbjct: 699 STLDNAYWD 707
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 440 MILVWAPVR*VYLMQYQMWVA 378
+I++W PV +YLM Q+W A
Sbjct: 551 VIILWLPVIIIYLMDIQIWYA 571
>06_03_1248 + 28685911-28687719
Length = 602
Score = 27.9 bits (59), Expect = 6.7
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Frame = +2
Query: 209 EKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECD-----ALFAESDDEV 373
+K STS W P L AFT + ++ R + + + A A + D
Sbjct: 123 DKAKAAAASTSRWSAVSPRQLMQKASNAFTRGSSSKSRAAKKDKEAATPAATSAAAKDAA 182
Query: 374 EVLPTSDI---ASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPL----SEPSSAHTPVP 532
TS + A+ K V+ T + PT + + QP +EPS A V
Sbjct: 183 TPASTSAVRKKAATPATSAAGKAVAGASPGPTRAQPTEEHHQQPTEAPPAEPSPAAAAVQ 242
Query: 533 EEYQT 547
EE T
Sbjct: 243 EEAVT 247
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 356 ESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
E +DE E PT S+ +++ +P+SSN +ST+S+P
Sbjct: 222 EEEDEEEFQPTPISTSSQRSQKGKRPLSSN--SSTLSSP 258
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 594 DIHNKRFQLSWNYQVKV*YSSGTGVCADEGSESGCKLTS 478
+IH + FQ + K+ ++ G+G CA EG ++G K +S
Sbjct: 1039 EIHKQAFQSYYTACQKMVHAEGSGACA-EGFQAGFKPSS 1076
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 383 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVP 532
PTS +S P P SSN ++ + PT +L S PSS+ + P
Sbjct: 19 PTSPPSS--CRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPP 66
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Frame = +2
Query: 266 SLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSN 445
S I+ S D + NE++E D + DD ++ + +I + N
Sbjct: 1960 STAPIITAEAMSVDDRNEDNEQLESDTTQSSVDDRLQQADQQSVKGSIDSRGSGISADRN 2019
Query: 446 YVNSTISNPTF---DVNLQPLSE-PSSAHTPVPEEYQTF 550
V ST+ P + D + + + E PSS P+ TF
Sbjct: 2020 LVRSTVIAPGYVPSDADERIIVELPSSMVRPLKVVRGTF 2058
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,326
Number of Sequences: 37544
Number of extensions: 309029
Number of successful extensions: 1048
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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